DIRECT SELECTION OF DNA-SEQUENCES CONSERVED BETWEEN SPECIES

被引:17
作者
SEDLACEK, Z [1 ]
KONECKI, DS [1 ]
SIEBENHAAR, R [1 ]
KIOSCHIS, P [1 ]
POUSTKA, A [1 ]
机构
[1] DEUTSCH KREBSFORSCHUNGSZENTRUM,NEUENHEIMER FELD 506,W-6900 HEIDELBERG,GERMANY
关键词
D O I
10.1093/nar/21.15.3419
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
An essential requirement in the analysis of genomes is the identification of functionally important sequence elements, which are often evolutionarily conserved. We describe here the development of a novel procedure for the selective isolation of conserved sequences which is based on hybridization of PCR-amplifiable DNA fragments from the whole genome of one species to biotinylated DNA from a genomic region of another species. The interspecies DNA hybrids are immobilized and the PCR-amplifiable DNA fragments are eluted, amplified and after further hybridization-amplification rounds cloned. This method was used for the generation of sublibraries of conserved sequences from mouse and pig DNA from regions corresponding to cosmids from the human Xq28 region. Mouse and pig homologs of sequences containing exons of known human genes, as well as exons from novel genes have been identified.
引用
收藏
页码:3419 / 3425
页数:7
相关论文
共 26 条
[1]   BUFFER GRADIENT GELS AND S-35 LABEL AS AN AID TO RAPID DNA-SEQUENCE DETERMINATION [J].
BIGGIN, MD ;
GIBSON, TJ ;
HONG, GF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1983, 80 (13) :3963-3965
[2]   EXON AMPLIFICATION - A STRATEGY TO ISOLATE MAMMALIAN GENES BASED ON RNA SPLICING [J].
BUCKLER, AJ ;
CHANG, DD ;
GRAW, SL ;
BROOK, JD ;
HABER, DA ;
SHARP, PA ;
HOUSMAN, DE .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1991, 88 (09) :4005-4009
[3]   SEQUENCE OF HUMAN GLUCOSE-6-PHOSPHATE-DEHYDROGENASE CLONED IN PLASMIDS AND A YEAST ARTIFICIAL CHROMOSOME [J].
CHEN, EY ;
CHENG, A ;
LEE, A ;
KUANG, WJ ;
HILLIER, L ;
GREEN, P ;
SCHLESSINGER, D ;
CICCODICOLA, A ;
DURSO, M .
GENOMICS, 1991, 10 (03) :792-800
[4]  
COLINS FS, 1992, NAT GENET, V1, P3
[5]   THE MOUSE IGH 3'-ENHANCER [J].
DARIAVACH, P ;
WILLIAMS, GT ;
CAMPBELL, K ;
PETERSSON, S ;
NEUBERGER, MS .
EUROPEAN JOURNAL OF IMMUNOLOGY, 1991, 21 (06) :1499-1504
[6]  
DELSAL G, 1989, BIOTECHNIQUES, V7, P514
[7]   MOLECULAR-CLONING AND ANALYSIS OF THE FRAGILE X-REGION IN MAN [J].
DIETRICH, A ;
KIOSCHIS, P ;
MONACO, AP ;
GROSS, B ;
KORN, B ;
WILLIAMS, SV ;
SHEER, D ;
HEITZ, D ;
OBERLE, I ;
TONIOLO, D ;
WARREN, ST ;
LEHRACH, H ;
POUSTKA, A .
NUCLEIC ACIDS RESEARCH, 1991, 19 (10) :2567-2572
[8]   THE ISOLATION AND CHARACTERIZATION OF A NOVEL CDNA DEMONSTRATING AN ALTERED MESSENGER-RNA LEVEL IN NONTUMORIGENIC WILMS MICROCELL HYBRID-CELLS [J].
DOWDY, SF ;
LAI, KM ;
WEISSMAN, BE ;
MATSUI, Y ;
HOGAN, BLM ;
STANBRIDGE, EJ .
NUCLEIC ACIDS RESEARCH, 1991, 19 (20) :5763-5769
[9]  
EISINGER DP, UNPUB
[10]  
FRITZ R, UNPUB