A GENETIC-MAP OF CHROMOSOME-1 - COMPARISON OF DIFFERENT DATA SETS AND LINKAGE PROGRAMS

被引:13
作者
ROULEAU, GA [1 ]
BAZANOWSKI, A [1 ]
GUSELLA, JF [1 ]
HAINES, JL [1 ]
机构
[1] HARVARD UNIV,SCH MED,DEPT GENET,BOSTON,MA 02115
关键词
D O I
10.1016/0888-7543(90)90163-O
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
We have used 22 chromosome 1 loci to construct a genetic linkage map of this autosome using the Venezuelan Reference Pedigree. These markers formed two linkage groups separated by an interval of more than 30 cM. Linkage maps were constructed separately using the computer programs LINKAGE and MAPMAKER to determine their relative speed, efficiency, and accuracy. We found that both programs generated maps with the same order and distances, although the LINKAGE program derived more information from the data, allowing placement of one additional marker. Many of the probes have previously been mapped using the CEPH pedigrees. However, the current map is generated from a different data set and so can be used to increase the certainty of locus order and map position. Ultimately, the generation and confirmation of a 1-cM map of this chromosome will require such multiple data sets. © 1990.
引用
收藏
页码:313 / 318
页数:6
相关论文
共 32 条
[1]   GENE FOR VON RECKLINGHAUSEN NEUROFIBROMATOSIS IS IN THE PERICENTROMERIC REGION OF CHROMOSOME-17 [J].
BARKER, D ;
WRIGHT, E ;
NGUYEN, K ;
CANNON, L ;
FAIN, P ;
GOLDGAR, D ;
BISHOP, DT ;
CAREY, J ;
BATY, B ;
KIVLIN, J ;
WILLARD, H ;
WAYE, JS ;
GREIG, G ;
LEINWAND, L ;
NAKAMURA, Y ;
OCONNELL, P ;
LEPPERT, M ;
LALOUEL, JM ;
WHITE, R ;
SKOLNICK, M .
SCIENCE, 1987, 236 (4805) :1100-1102
[2]  
BIRD TD, 1980, AM J HUM GENET, V32, pA99
[3]   STRUCTURAL GENE FOR BETA-NERVE GROWTH-FACTOR NOT DEFECTIVE IN FAMILIAL DYSAUTONOMIA [J].
BREAKEFIELD, XO ;
ORLOFF, G ;
CASTIGLIONE, C ;
COUSSENS, L ;
AXELROD, FB ;
ULLRICH, A .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1984, 81 (13) :4213-4216
[4]   PVU-II RFLP AT THE HUMAN CHROMOSOME-1 ALPHA-L-FUCOSIDASE GENE LOCUS (FUCA1) [J].
DARBY, JK ;
JOHNSEN, J ;
NAKASHIMA, P ;
WILLEMS, PJ ;
OBRIEN, JS ;
FOWLER, ML ;
SHOWS, TB ;
SHOOTER, EM ;
CAVALLISFORZA, LL .
NUCLEIC ACIDS RESEARCH, 1986, 14 (23) :9543-9543
[5]   A GENETIC-LINKAGE MAP OF THE HUMAN GENOME [J].
DONISKELLER, H ;
GREEN, P ;
HELMS, C ;
CARTINHOUR, S ;
WEIFFENBACH, B ;
STEPHENS, K ;
KEITH, TP ;
BOWDEN, DW ;
SMITH, DR ;
LANDER, ES ;
BOTSTEIN, D ;
AKOTS, G ;
REDIKER, KS ;
GRAVIUS, T ;
BROWN, VA ;
RISING, MB ;
PARKER, C ;
POWERS, JA ;
WATT, DE ;
KAUFFMAN, ER ;
BRICKER, A ;
PHIPPS, P ;
MULLERKAHLE, H ;
FULTON, TR ;
NG, S ;
SCHUMM, JW ;
BRAMAN, JC ;
KNOWLTON, RG ;
BARKER, DF ;
CROOKS, SM ;
LINCOLN, SE ;
DALY, MJ ;
ABRAHAMSON, J .
CELL, 1987, 51 (02) :319-337
[6]  
DRACOPOLI N C, 1988, Genomics, V3, P161, DOI 10.1016/0888-7543(88)90148-6
[7]  
DRACOPOLI NC, 1987, CANCER RES, V47, P3995
[8]  
DRACOPOLI NC, 1988, AM J HUM GENET, V43, P462
[9]   A TECHNIQUE FOR RADIOLABELING DNA RESTRICTION ENDONUCLEASE FRAGMENTS TO HIGH SPECIFIC ACTIVITY [J].
FEINBERG, AP ;
VOGELSTEIN, B .
ANALYTICAL BIOCHEMISTRY, 1983, 132 (01) :6-13
[10]   2 RFLPS AT THE HUMAN RENIN (REN) GENE LOCUS [J].
FROSSARD, PM ;
GONZALEZ, PA ;
FRITZ, LC ;
PONTE, PA ;
FIDDES, JC ;
ATLAS, SA .
NUCLEIC ACIDS RESEARCH, 1986, 14 (10) :4380-4380