THE EVOLUTION AND RECOGNITION OF PROTEIN-SEQUENCE REPEATS

被引:18
作者
HERINGA, J
机构
来源
COMPUTERS & CHEMISTRY | 1994年 / 18卷 / 03期
关键词
D O I
10.1016/0097-8485(94)85018-6
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Many proteins sequences contain motifs which display similarity. The similarities between the repeats are a result of gene duplication and/or gene fusion. The evolutionary role of repeats within protein sequences is considered and some repeat examples are given ranging from tandem repeats to multiple types of repeats which are sequentially interspersed. Existing computer methods to delineate repeats in individual protein sequences are discussed and a novel sensitive repeat recognition method is introduced.
引用
收藏
页码:233 / 243
页数:11
相关论文
共 45 条
[1]   THE PRIMARY STRUCTURE OF HUMAN HEMOPEXIN DEDUCED FROM CDNA SEQUENCE - EVIDENCE FOR INTERNAL, REPEATING HOMOLOGY [J].
ALTRUDA, F ;
POLI, V ;
RESTAGNO, G ;
ARGOS, P ;
CORTESE, R ;
SILENGO, L .
NUCLEIC ACIDS RESEARCH, 1985, 13 (11) :3841-3859
[3]   A SENSITIVE PROCEDURE TO COMPARE AMINO-ACID-SEQUENCES [J].
ARGOS, P .
JOURNAL OF MOLECULAR BIOLOGY, 1987, 193 (02) :385-396
[4]   ROLES OF REPETITIVE SEQUENCES [J].
BELL, GI .
COMPUTERS & CHEMISTRY, 1992, 16 (02) :135-143
[5]  
BOGUSKI MS, 1992, NEW BIOL, V4, P247
[6]  
BOSWELL DR, 1983, NJUCLEIC ACIDS RES, V12, P457
[7]  
BRANDEN C, 1991, INTRO PROTEIN STRUCT, P236
[8]   REPEATING STRUCTURE OF CHICK TROPOELASTIN REVEALED BY COMPLEMENTARY-DNA CLONING [J].
BRESSAN, GM ;
ARGOS, P ;
STANLEY, KK .
BIOCHEMISTRY, 1987, 26 (06) :1497-1503
[9]   THE PRIMARY STRUCTURE OF TRANSCRIPTION FACTOR TFIIIA HAS 12 CONSECUTIVE REPEATS [J].
BROWN, RS ;
SANDER, C ;
ARGOS, P .
FEBS LETTERS, 1985, 186 (02) :271-274
[10]   THE RELATION BETWEEN THE DIVERGENCE OF SEQUENCE AND STRUCTURE IN PROTEINS [J].
CHOTHIA, C ;
LESK, AM .
EMBO JOURNAL, 1986, 5 (04) :823-826