PROBABILISTIC IDENTIFICATION OF CORYNEFORM BACTERIA

被引:7
作者
KAMPFER, P [1 ]
SEILER, H [1 ]
机构
[1] SUDDEUTSCH VERSUCHS & FORSCH SANSTALT MILCHWIRTSCH, D-85354 FREISING, GERMANY
关键词
D O I
10.2323/jgam.39.215
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A frequency matrix of positive results was constructed for major phena defined in a previous phenetic classification of several species of coryneform and related taxa. A total of 280 physiological characters from 441 strains were taken as basis for this identification matrix. Minimum number of diagnostic characters for the matrix was selected using computer programs for calculation of different separation indices (CHARSEP) and selection of group diagnostic properties (DIACHAR). The resulting matrix consisted of 31 phena versus 58 characters. Phena overlap within the matrix was found to be relatively small (OVERMAT program). For each phenon, the identification scores for the most typical hypothetical organism was satisfactory (MOSTTYP program). The matrix was evaluated theoretically and practically (MATIDEN program). The overall identification rate (442 strains) of the theoretical evaluation (Willcox probability >0.99) was 92.0%. In the practical evaluation (40 strains) a total of 33 strains (82.5%) were identified with a Willcox probability >0.9. For minor clusters and single strains belonging to genetically and chemotaxonomically defined species, additional identification tables are provided. When used in combination with chemotaxonomic methods, the identification matrix can improve the identification of coryneform bacteria.
引用
收藏
页码:215 / 236
页数:22
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