DISTRIBUTION AND ORGANIZATION OF A TANDEMLY REPEATED 352-BP SEQUENCE IN THE ORYZAE FAMILY

被引:36
作者
DEKOCHKO, A [1 ]
KIEFER, MC [1 ]
CORDESSE, F [1 ]
REDDY, AS [1 ]
DELSENY, M [1 ]
机构
[1] CNRS,PLANT PHYSIOL & MOLEC BIOL LAB,URA 565,AVE VILLENEUVE,F-66860 PERPIGNAN,FRANCE
关键词
CULTIVATED RICE; WILD RICE; RFLP; SATELLITE DNA; EVOLUTION;
D O I
10.1007/BF00231278
中图分类号
S3 [农学(农艺学)];
学科分类号
0901 ;
摘要
A 352-bp EcoRI fragment from rice DNA was cloned and shown to be a member of a tandem repeat. Sequence determination revealed homologies with human alpha satellite DNA and maize knob heterochromatin specific repeat. This 352-bp sequence is highly specific for the AA genome of rice. However, copy number and sequence organization are variable, depending on the accession analyzed. Several examples of amplification were observed in O. rufipogon and O. longistaminata. Use of resolutive polyacrylamide gel electrophoresis and 4-bp cutter enzymes allowed one to distinguish between the Indica and Japonica subtypes of O. sativa. The same method also discriminates between two groups of O. rufipogon, the presumed ancestor of O. sativa, suggesting that the present day Indica and Japonica subtypes originated independently from two O. rufipogon distinct populations.
引用
收藏
页码:57 / 64
页数:8
相关论文
共 32 条
  • [1] MOLECULAR DESCRIPTION OF TELOMERIC HETEROCHROMATIN IN SECALE SPECIES
    BEDBROOK, JR
    JONES, J
    ODELL, M
    THOMPSON, RD
    FLAVELL, RB
    [J]. CELL, 1980, 19 (02) : 545 - 560
  • [2] AMPLIFICATION OF REARRANGED REPEATED DNA-SEQUENCES IN CEREAL PLANTS
    BEDBROOK, JR
    ODELL, M
    FLAVELL, RB
    [J]. NATURE, 1980, 288 (5787) : 133 - 137
  • [3] SMALL TANDEMLY REPEATED DNA-SEQUENCES OF HIGHER-PLANTS LIKELY ORIGINATE FROM A TRANSFER-RNA GENE ANCESTOR
    BENSLIMANE, AA
    DRON, M
    HARTMANN, C
    RODE, A
    [J]. NUCLEIC ACIDS RESEARCH, 1986, 14 (20) : 8111 - 8119
  • [4] RIBOSOMAL GENE SPACER LENGTH VARIABILITY IN CULTIVATED AND WILD RICE SPECIES
    CORDESSE, F
    SECOND, G
    DELSENY, M
    [J]. THEORETICAL AND APPLIED GENETICS, 1990, 79 (01) : 81 - 88
  • [5] CHLOROPLAST DNA DIVERSITY IN WILD AND CULTIVATED SPECIES OF RICE (GENUS ORYZA, SECTION ORYZA) - CLADISTIC-MUTATION AND GENETIC-DISTANCE ANALYSIS
    DALLY, AM
    SECOND, G
    [J]. THEORETICAL AND APPLIED GENETICS, 1990, 80 (02) : 209 - 222
  • [6] DALLY AM, 1988, THESIS U MONTPELLIER
  • [7] ISOZYMIC VARIABILITY OF TRADITIONAL RICE (ORYZA-SATIVA-L) IN AFRICA
    DEKOCHKO, A
    [J]. THEORETICAL AND APPLIED GENETICS, 1987, 73 (05) : 675 - 682
  • [8] STRUCTURAL AND TRANSCRIPTIONAL CHARACTERIZATION OF THE EXTERNAL SPACER OF A RIBOSOMAL-RNA NUCLEAR GENE FROM A HIGHER-PLANT
    DELCASSOTREMOUSAYGUE, D
    GRELLET, F
    PANABIERES, F
    ANANIEV, ED
    DELSENY, M
    [J]. EUROPEAN JOURNAL OF BIOCHEMISTRY, 1988, 172 (03): : 767 - 776
  • [9] KNOB HETEROCHROMATIN HOMOLOGY IN MAIZE AND ITS RELATIVES
    DENNIS, ES
    PEACOCK, WJ
    [J]. JOURNAL OF MOLECULAR EVOLUTION, 1984, 20 (3-4) : 341 - 350
  • [10] DOD B, 1989, MOL BIOL EVOL, V6, P478