STRUCTURE OF THE ADP COMPLEX OF THE 3-PHOSPHOGLYCERATE KINASE FROM BACILLUS-STEAROTHERMOPHILUS AT 1.65 ANGSTROM

被引:83
作者
DAVIES, GJ
GAMBLIN, SJ
LITTLECHILD, JA
DAUTER, Z
WILSON, KS
WATSON, HC
机构
[1] UNIV BRISTOL,SCH MED SCI,DEPT BIOCHEM,BRISTOL BS8 1TD,AVON,ENGLAND
[2] DESY,EMBL,D-22603 HAMBURG,GERMANY
来源
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY | 1994年 / 50卷
关键词
D O I
10.1107/S0907444993011138
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The structure of the ADP complex of the enzyme 3-phosphoglycerate kinase (PGK, E.C.2.7.2.3), from Bacillus stearothermophilus NCA-1503 has been determined by the method of molecular replacement. The structure has been refined to an R factor of 0.16 for all data between 10.0 and 1.65 angstrom resolution, using data collected on the Hendrix-Lentfer imaging plate at the EMBL outstation in Hamburg. The r.m.s. deviations from stereochemical ideality are 0.010 and 0.011 angstrom for bonds and planes, respectively. Although crystallized in the presence of the nucleotide product MgATP, the high-resolution structure reveals the bound nucleotide to be MgADP reflecting the low intrinsic ATPase activity of PGK. Although the two domains of this enzyme are found to be some 4.5-degrees closer together than is found in the yeast and horse-muscle apo-enzyme structures, this structure represents the 'open' rather than the 'closed', catalytically competent form, of the enzyme.
引用
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页码:202 / 209
页数:8
相关论文
共 36 条
  • [1] SEQUENCE, STRUCTURE AND ACTIVITY OF PHOSPHOGLYCERATE KINASE - POSSIBLE HINGE-BENDING ENZYME
    BANKS, RD
    BLAKE, CCF
    EVANS, PR
    HASER, R
    RICE, DW
    HARDY, GW
    MERRETT, M
    PHILLIPS, AW
    [J]. NATURE, 1979, 279 (5716) : 773 - 778
  • [2] SITE-DIRECTED MUTAGENESIS OF YEAST PHOSPHOGLYCERATE KINASE - ARGININE-65, ARGININE-121 AND ARGININE-168
    BARBER, MD
    GAMBLIN, SJ
    WATSON, HC
    LITTLECHILD, JA
    [J]. FEBS LETTERS, 1993, 320 (03) : 193 - 197
  • [3] PHOSPHOGLYCERATE KINASE
    BLAKE, CCF
    RICE, DW
    [J]. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY OF LONDON SERIES B-BIOLOGICAL SCIENCES, 1981, 293 (1063) : 93 - 104
  • [4] CONSIDERATION OF POSSIBILITY THAT SLOW STEP IN PROTEIN DENATURATION REACTIONS IS DUE TO CIS-TRANS ISOMERISM OF PROLINE RESIDUES
    BRANDTS, JF
    HALVORSON, HR
    BRENNAN, M
    [J]. BIOCHEMISTRY, 1975, 14 (22) : 4953 - 4963
  • [5] CRYSTALLOGRAPHIC REFINEMENT BY SIMULATED ANNEALING APPLICATION TO A 2.8-A RESOLUTION STRUCTURE OF ASPARTATE-AMINOTRANSFERASE
    BRUNGER, AT
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1988, 203 (03) : 803 - 816
  • [6] 3-DIMENSIONAL STRUCTURE OF D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
    BUEHNER, M
    FORD, GC
    MORAS, D
    OLSEN, KW
    ROSSMANN, MG
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1974, 90 (01) : 25 - +
  • [7] CCP4, 1979, CCP4 SUITE PROGRAMS
  • [8] CROWTHER RA, 1972, MOL REPLACEMENT METH
  • [9] REFINEMENT OF GLUCOSE-ISOMERASE FROM STREPTOMYCES-ALBUS AT 1.65-A WITH DATA FROM AN IMAGING PLATE
    DAUTER, Z
    TERRY, H
    WITZEL, H
    WILSON, KS
    [J]. ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1990, 46 : 833 - 841
  • [10] SEQUENCE AND EXPRESSION OF THE GENE ENCODING 3-PHOSPHOGLYCERATE KINASE FROM BACILLUS-STEAROTHERMOPHILUS
    DAVIES, GJ
    LITTLECHILD, JA
    WATSON, HC
    HALL, L
    [J]. GENE, 1991, 109 (01) : 39 - 45