PHYLOGENETIC COMPARISON OF 2 POLYCYCLIC AROMATIC HYDROCARBON-DEGRADING MYCOBACTERIA

被引:25
作者
GOVINDASWAMI, M
FELDHAKE, DJ
KINKLE, BK
MINDELL, DP
LOPER, JC
机构
[1] UNIV CINCINNATI,MED CTR,DEPT MOLEC GENET BIOCHEM & MICROBIOL,CINCINNATI,OH 45267
[2] UNIV CINCINNATI,MED CTR,DEPT ENVIRONM HLTH,CINCINNATI,OH 45267
[3] UNIV CINCINNATI,DEPT BIOL SCI,CINCINNATI,OH 45221
关键词
D O I
10.1128/AEM.61.9.3221-3226.1995
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Two mycobacterial strains previously isolated from fossil-fuel-contaminated environments and shown to degrade four- and/or five-ring polycyclic aromatic hydrocarbons were further characterized. The two strains, PYR-I and RJGII-135, had similar growth characteristics, colony morphologies, and scotochromogenic pigmentations. DNA amplification fingerprints obtained with total genomic DNA indicated some strain similarities but with several distinctly different bands. Moreover, phylogenetic analysis based upon essentially full-length 16S rRNA gene sequences separates the two strains as distinct species within the fast-growing group of mycobacteria. Although both strains are thermosensitive, strain PYR-I has the bulged U between positions 184 and 193 characteristic of thermotolerant mycobacteria. Both strains are of potential use for reintroduction into and bioremediation of polycyclic aromatic hydrocarbon-contaminated soils.
引用
收藏
页码:3221 / 3226
页数:6
相关论文
共 28 条
[1]   DNA DIVERSITY AMONG CLINICAL ISOLATES OF HELICOBACTER-PYLORI DETECTED BY PCR-BASED RAPD FINGERPRINTING [J].
AKOPYANZ, N ;
BUKANOV, NO ;
WESTBLOM, TU ;
KRESOVICH, S ;
BERG, DE .
NUCLEIC ACIDS RESEARCH, 1992, 20 (19) :5137-5142
[2]  
BIRNBOIM HC, 1979, NUCLEIC ACIDS RES, V7, P1513
[3]   DEGRADATION OF PHENANTHRENE, FLUORENE, FLUORANTHENE, AND PYRENE BY A MYCOBACTERIUM SP [J].
BOLDRIN, B ;
TIEHM, A ;
FRITZSCHE, C .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1993, 59 (06) :1927-1930
[4]   APPLICATION OF DNA AMPLIFICATION FINGERPRINTING (DAF) TO MIXED CULTURE BIOREACTORS [J].
BREEN, A ;
ROPE, AF ;
TAYLOR, D ;
LOPER, JC ;
SFERRA, PR .
JOURNAL OF INDUSTRIAL MICROBIOLOGY, 1995, 14 (01) :10-16
[5]   DNA AMPLIFICATION FINGERPRINTING USING VERY SHORT ARBITRARY OLIGONUCLEOTIDE PRIMERS [J].
CAETANOANOLLES, G ;
BASSAM, BJ ;
GRESSHOFF, PM .
BIO-TECHNOLOGY, 1991, 9 (06) :553-557
[6]  
CERNIGLIA CE, COMMUNICATION
[7]  
CERNIGLIA CE, 1989, METABOLISM POLYCYCLI, P41
[8]   AMPLIFICATION FRAGMENT LENGTH POLYMORPHISM IN BRUCELLA STRAINS BY USE OF POLYMERASE CHAIN-REACTION WITH ARBITRARY PRIMERS [J].
FEKETE, A ;
BANTLE, JA ;
HALLING, SM ;
STICH, RW .
JOURNAL OF BACTERIOLOGY, 1992, 174 (23) :7778-7783
[9]  
Felsenstein J., 1993, PHYLIP PHYLOGENY INF
[10]   DEGRADATION OF PYRENE AT LOW DEFINED OXYGEN CONCENTRATIONS BY A MYCOBACTERIUM SP [J].
FRITZSCHE, C .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1994, 60 (05) :1687-1689