AN EFFECTIVE ENZYME INTERACTING WITH POLY(DT-DA).POLY(DT-DA) - A DYNAMIC ENHANCER-REPRESSOR ACTION

被引:1
作者
BEGER, R
PROHOFSKY, EW
机构
[1] Department of Physics, Purdue University, West Lafayette, IN
关键词
D O I
10.1080/07391102.1991.10507910
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The Green function technique is used to study the open hydrogen bond probability of poly(dT-dA).poly(dT-dA) when an effective enzyme is attached to the helix. The DNA interstrand hydrogen bond mean motion and probability of fluctuating to an open state depends on the internal vibrational frequency of the enzyme. An enzyme with internal frequency of 80 cm-1 reduces hydrogen bond motion and the resulting probability of hydrogen bond fluctuational opening. An enzyme with internal frequency of 72 cm-1 increases hydrogen bond motion and the probability of hydrogen bond breaking.
引用
收藏
页码:239 / 249
页数:11
相关论文
共 27 条
[1]  
BOTTGER H, 1983, PRINCIPLES THEORY LA, P87
[2]  
BROOKS CL, 1988, ADV CHEM PHYS, V71, P1
[3]  
CALLAWAY J, 1974, QUANTUM THEORY SOLID, P824
[4]   A SELF-CONSISTENT MEAN-FIELD CALCULATION OF A HOMOPOLYMER DEOXYRIBOSE NUCLEIC-ACID STRAND SEPARATION - BOND BREAKING IN A MACROMOLECULE [J].
CHEN, YZ ;
PROHOFSKY, EW .
JOURNAL OF CHEMICAL PHYSICS, 1991, 94 (06) :4665-4667
[5]  
ELLIOTT EJ, 1975, P INT SCH PHYSICS, V55, P342
[6]   LATTICE VIBRATIONAL MODES OF POLY(RU).POLY(RA) - COUPLED SINGLE-HELICAL APPROACH [J].
EYSTER, JM ;
PROHOFSKY, EW .
BIOPOLYMERS, 1974, 13 (12) :2527-2543
[7]   BREATHING MODES NEAR A JUNCTION OF DNA DOUBLE HELICES [J].
FENG, Y ;
BEGER, RD ;
HUA, X ;
PROHOFSKY, EW .
PHYSICAL REVIEW A, 1989, 40 (08) :4612-4619
[8]   URANYL MEDIATED PHOTOFOOTPRINTING REVEALS STRONG ESCHERICHIA-COLI RNA-POLYMERASE DNA BACKBONE CONTACTS IN THE +10 REGION OF THE DEOP1 PROMOTER OPEN COMPLEX [J].
JEPPESEN, C ;
NIELSEN, PE .
NUCLEIC ACIDS RESEARCH, 1989, 17 (13) :4947-4956
[9]   PREDICTED ROLE OF PARTICULAR PHONONS IN THE STRAND SEPARATION MELTING OF THE DNA DOUBLE HELIX [J].
KIM, Y ;
PROHOFSKY, EW .
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 1986, 4 (03) :437-442
[10]   DEFECT-MEDIATED HYDROGEN-BOND INSTABILITY OF POLY(DG)-POLY(DC) [J].
KIM, Y ;
PROHOFSKY, EW .
PHYSICAL REVIEW B, 1986, 33 (08) :5676-5681