MATRIX-ASSISTED LASER-DESORPTION IONIZATION OF OLIGONUCLEOTIDES WITH VARIOUS MATRICES

被引:55
作者
TANG, K [1 ]
ALLMAN, SL [1 ]
CHEN, CH [1 ]
机构
[1] OAK RIDGE NATL LAB,POB 2008,BLDG 5500,MS-6378,OAK RIDGE,TN 37831
关键词
D O I
10.1002/rcm.1290071016
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Ferulic acid, 3-hydroxypicolinic acid (3-HPA), and 2,5-dihydroxybenzoic acid (2,5-DHB) were used as matrices in MALDI of various oligonucleotides. It was found that 2,5-DHB is an excellent matrix for polydeoxyribothymidylic acid. A poly-T oligonucleotide with a size of 130 bases was successfully detected. 3-HPA was found to be a good matrix for MALDI of homo-oligomeric deoxynucleotides as well as those containing four different bases. Parent ions of pd(A)60, d(T)100, d(G)40, and d(C)40 were observed, and a mixed-base oligonucleotide of 150-mer was also detected. Polymer ions of poly-A as large as 420-mer were measured; however, the efficiency for detecting poly-T with 3-HPA as a matrix was slightly worse than when 2,5-DHB was used. Comparisons of three matrices for various oligonucleotides is also presented.
引用
收藏
页码:943 / 948
页数:6
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