COMPARATIVE-STUDY OF MULTICANONICAL AND SIMULATED ANNEALING ALGORITHMS IN THE PROTEIN-FOLDING PROBLEM

被引:108
作者
HANSMANN, UHE [1 ]
OKAMOTO, Y [1 ]
机构
[1] NARA WOMENS UNIV,DEPT PHYS,NARA 630,JAPAN
来源
PHYSICA A | 1994年 / 212卷 / 3-4期
关键词
D O I
10.1016/0378-4371(94)90342-5
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
We compare a few variants of the recently proposed multicanonical method with the well known simulated annealing for the effectiveness in search of the energy global minimum of a biomolecular system. For this we study in detail Met-enkephalin, one of the simplest peptides. We show that the new method not only outperforms simulated annealing in the search of the energy groundstate but also provides more statistical-mechanical information about the system.
引用
收藏
页码:415 / 437
页数:23
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