RELATIONSHIPS BETWEEN SEROTYPES AND GENOTYPES OF HEPATITIS-B VIRUS - GENETIC CLASSIFICATION OF HBV BY USE OF SURFACE GENES

被引:14
作者
OHBA, KI
MIZOKAMI, M
OHNO, T
SUZUKI, K
ORITO, E
LAU, JYN
INA, Y
IKEO, K
GOJOBORI, T
机构
[1] NAGOYA CITY UNIV,SCH MED,DEPT MED 2,NAGOYA,AICHI 467,JAPAN
[2] UNIV FLORIDA,DEPT MED,DIV GASTROENTEROL HEPATOL & NUTR,HEPATOBILIARY DIS SECT,GAINESVILLE,FL 32610
[3] NATL INST GENET,DNA RES CTR,MISHIMA,SHIZUOKA 411,JAPAN
关键词
HEPATITIS B VIRUS (HBV); SUBTYPE; GENOTYPE; PHYLOGENETIC TREE; MOLECULAR EVOLUTION;
D O I
10.1016/S0168-1702(95)00069-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Hepatitis B virus (HBV) surface antigen (HBsAg), which is encoded by the HBV S gene, is conventionally classified into 4 serological subtypes, adw, adr, ayw and ayr. To determine the relationship between the HBsAg seroreactivity and the nucleotide sequence diversity of the HBV S gene, the nucleotide sequences of S genes for HBV isolates reported so far were aligned with each other. The numbers of nucleotide substitutions were then estimated by the 6-parameter method, and a phylogenetic tree was constructed by the unweighted paired grouping method with arithmetic mean (UPGMA) and the neighbor-joining (NJ) method. The phylogenetic trees constructed showed that all isolates were grouped into 4 genotypes (gyw, gdw-1, gdw-2, and gdr), More importantly, the genotypes did not necessarily correspond to the conventional serotypes. In particular, serotype 'adw' can be any of genotypes gdw-1, gdw-5 or gdr. Thus, genotyping by S genes gives more accurate information about genetic variation of HBV.
引用
收藏
页码:25 / 34
页数:10
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