The capacity of delayed onset of rapamycin (RAPA) therapy to block process of destruction was examined in rats undergoing heart allograft rejection. Untreated Wistar Furth (WFu; RT-1u) recipients reject Buffalo (BUF; RT-1b) heart allograft with a mean survival time (MST) of 6.5+/-0.5 days. A 14-day i.v. infusion of 0.8 mg/kg RAPA begun on the day of transplantation prolonged the survival to 74.1+/-20.2 days (P<0.001), 0.2 mg/kg to 32.2+/-10.0 days (P<0.001), and 0.08 mg/kg to 36.4+/-11.8 days (P<0.001). When RAPA therapy (0.8 mg/kg) was begun 3 or 4 days after transplantation, the grafts survived 85.2+/-31.1 (P<0.001), and 70.2+/-43.3 (P<0.005) days, respectively. Therapy initiated on day 5 was much less effective; most transplants were rejected within 10 days; one graft survived 32 and two grafts 60 days (MST = 17.6+/-20.0, NS). A 0.2 mg/kg RAPA dose prolonged graft survival with initial use on days 3 (31.6+/-12.2 days; P<0.001) or 4 (31.4+/-8.1 days; P<0.001) but not on day 5. The 0.08 mg/kg RAPA prolonged hearts only when started on day 3 (47.2+/-2.7 days; P<0.001) but not on days 4 or 5. WFu recipients treated with a subtherapeutic dose of cyclosporine (1 mg/kg; 9.1+/-1.5 days) displayed prolonged heart allograft function when treated subsequently with RAPA (0.8 or 0.08) beginning from days 4, 5, or 6 postgrafting. These in vivo results are supported by in vitro experiments. The frequency of BUF alloreactive elements among normal WFu LN cells (fTc) was 337+/-139/10(6) T cells in limiting dilution assay. Addition of RAPA (1 muMol) at the beginning of culture significantly reduced (P<0.025) the fTc to 17+/-6.6/10(6) or alternatively on days 4 or 6 to 37.3+/-20.0/10(6) and 58.6+/-21.8/10(6), respectively. Thus, both in vivo and in vitro data demonstrate that delayed RAPA therapy may interrupt alloimmune reactions.