DETERMINATION OF THE DNA-BINDING SITE OF THE GAL4 PROTEIN - A PHOTO-CIDNP STUDY

被引:3
作者
SERIKAWA, Y
SHIRAKAWA, M
KYOGOKU, Y
机构
[1] Institute for Protein Research, Osaka University, Suita, Osaka
来源
FEBS LETTERS | 1992年 / 299卷 / 03期
关键词
NMR; PHOTO-CIDNP; GAL4; UASG; ZINC FINGER; DNA BINDING;
D O I
10.1016/0014-5793(92)80115-W
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
After the assignment of H-1 NMR signals of aromatic side chains by means of specific deuteration, we analyzed the DNA binding site of GAL4 by measuring photo-CIDNP spectra. The results showed that Trp36 is involved in both the specific interaction with UAS(G) and non-specific DNA binding. This residue is located inside the Cys-rich region, but outside the putative Zn-finger. The photo-CIDNP spectrum also showed that the side chains of Tyr40 and His53 are not exposed on the surface of the protein.
引用
收藏
页码:205 / 208
页数:4
相关论文
共 18 条
[1]   ALTERING DNA-BINDING SPECIFICITY OF GAL4 REQUIRES SEQUENCES ADJACENT TO THE ZINC FINGER [J].
CORTON, JC ;
JOHNSTON, SA .
NATURE, 1989, 340 (6236) :724-727
[2]   COMPLETE ASSIGNMENT OF THE H-1-NMR SPECTRUM AND SECONDARY STRUCTURE OF THE DNA-BINDING DOMAIN OF GAL4 [J].
GADHAVI, PL ;
RAINE, ARC ;
ALEFOUNDER, PR ;
LAUE, ED .
FEBS LETTERS, 1990, 276 (1-2) :49-53
[3]   POLYPEPTIDE METAL CLUSTER CONNECTIVITIES IN CD(II) GAL4 [J].
GADHAVI, PL ;
DAVIS, AL ;
POVEY, JF ;
KEELER, J ;
LAUE, ED .
FEBS LETTERS, 1991, 281 (1-2) :223-226
[4]   STRUCTURE OF THE BINUCLEAR METAL-BINDING SITE IN THE GAL4 TRANSCRIPTION FACTOR [J].
GARDNER, KH ;
PAN, T ;
NARULA, S ;
RIVERA, E ;
COLEMAN, JE .
BIOCHEMISTRY, 1991, 30 (47) :11292-11302
[5]   SPECIFIC DNA-BINDING OF GAL4, A POSITIVE REGULATORY PROTEIN OF YEAST [J].
GINIGER, E ;
VARNUM, SM ;
PTASHNE, M .
CELL, 1985, 40 (04) :767-774
[7]  
Kaptein R, 1982, BIOL MAGN RESON, V4, P145
[8]   PRIMARY STRUCTURE OF THE SACCHAROMYCES-CEREVISIAE GAL4 GENE [J].
LAUGHON, A ;
GESTELAND, RF .
MOLECULAR AND CELLULAR BIOLOGY, 1984, 4 (02) :260-267
[9]   BASE SEQUENCE-SPECIFIC INTERACTIONS OF OPERATOR DNA FRAGMENTS WITH THE LAMBDA-CRO REPRESSOR COUPLED WITH CHANGES IN THEIR CONFORMATIONS [J].
LEE, SJ ;
SHIRAKAWA, M ;
AKUTSU, H ;
KYOGOKU, Y ;
SHIRAISHI, M ;
KITANO, K ;
SHIN, M ;
OHTSUKA, E ;
IKEHARA, M .
EMBO JOURNAL, 1987, 6 (04) :1129-1135
[10]  
OSHIMA Y, 1981, MOL BIOL YEAST SACCH, V1, P159