The Na,K-ATPase has three alpha isoforms which differ in cardiac glycoside sensitivity and tissue distribution. The rodent alpha1 isoform is relatively resistant to cardiac glycosides, while the alpha2 and alpha3 isoforms are quite sensitive. Because both the alpha2 and alpha3 isoforms are generally expressed in the same tissue, it has been difficult to differentiate and accurately determine the kinetics of ouabain binding to these isoforms. To more fully understand the interactions of the alpha2 and alpha3 isoforms with cardiac glycosides, the association and dissociation rates of ouabain binding were measured in transfected cell lines. cDNA's coding for the rat alpha2 and alpha3 isoforms were transfected into NIH 3T3 cells and characterized by Na,K-ATPase activity and [H-3]ouabain binding. By individually expressing the alpha2 and alpha3 isoforms in ouabain-insensitive NIH 3T3 cells, the ouabain-binding characteristics of each isoform could be accurately determined. The association rate constants of the alpha2 and alpha3 isoforms were similar while the dissociation rate constant was 33 times slower for the alpha3 isoform than the alpha2 isoform. Calculation of the dissociation constant (K(d)) from these rate constants yielded values of 115 and 1.6 nm for rat alpha2 and alpha3 isoforms, respectively. Scatchard analysis of the rat alpha2 isoform produced a similar value for K(d) of 37 +/- 9 nm. Inhibition of Na,K-ATPase activity indicates the rodent alpha1 isoform has an IC50 1000-fold higher than the alpha2 or alpha3 isoform at 4.8 X 10(-5) M. The results are consistent with the hypothesis that the order of ouabain affinity between the rat alpha isoforms of the Na,K-ATPase is alpha3 > alpha2 much greater than alpha1. (C) 1994 Academic Press, Inc.