AN ASSESSMENT OF THE PADE-LAPLACE METHOD FOR TRANSIENT ELECTRIC BIREFRINGENCE DECAY ANALYSIS

被引:6
作者
BOWERS, JS
PRUDHOMME, RK
FARINATO, RS
机构
[1] PRINCETON UNIV,DEPT CHEM ENGN,PRINCETON,NJ 08544
[2] AMER CYANAMID CO,DIV CHEM RES,STAMFORD,CT 06904
来源
COMPUTERS & CHEMISTRY | 1992年 / 16卷 / 03期
关键词
D O I
10.1016/0097-8485(92)80011-N
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
We implemented and tested the Pade-Laplace method for analyzing a sum of exponential decays, and applied it to transient electric birefringence decay measurements on DNA samples. The Pade-Laplace method involves integrating the decay data to calculate the Taylor expansion of the Laplace transform. The Pade approximant of the Laplace transform can be calculated from the Taylor series, and is then used to determine the number and value of the time constants in the decay. False solutions with complex and positive (diverging) exponentials were obtained from data but these false solutions were easily discarded. We found the method to be remarkably robust to random noise, but very sensitive to baseline errors. The same data sets were analyzed using the well-established deconvolution program CONTIN. The Pade-Laplace method could resolve time constants better than CONTIN from noisy data, but CONTIN compensated for baseline errors much more effectively. The time for executing either analysis on a microcomputer was almost the same.
引用
收藏
页码:249 / 259
页数:11
相关论文
共 30 条
[1]   DIRECT ANALYSIS OF CHEMICAL RELAXATION SIGNALS BY A METHOD BASED ON THE COMBINATION OF LAPLACE TRANSFORM AND PADE APPROXIMANTS [J].
AUBARD, J ;
LEVOIR, P ;
DENIS, A ;
CLAVERIE, P .
COMPUTERS & CHEMISTRY, 1987, 11 (03) :163-178
[2]  
BAJZER Z, 1990, EUR BIOPHYS J, V18, P101, DOI 10.1007/BF00183269
[3]   PADE-LAPLACE METHOD FOR ANALYSIS OF FLUORESCENCE INTENSITY DECAY [J].
BAJZER, Z ;
MYERS, AC ;
SEDAROUS, SS ;
PRENDERGAST, FG .
BIOPHYSICAL JOURNAL, 1989, 56 (01) :79-93
[4]  
BOWERS JS, 1991, THESIS PRINCETON U P
[5]  
CLAVERIE P, 1989, COMPUT PHYS REP, V9, P247
[6]   ANALYSIS OF EXPONENTIAL CURVES BY A METHOD OF MOMENTS, WITH SPECIAL ATTENTION TO SEDIMENTATION EQUILIBRIUM AND FLUORESCENCE DECAY [J].
DYSON, RD ;
ISENBERG, I .
BIOCHEMISTRY, 1971, 10 (17) :3233-+
[7]  
FREDERICQ E, 1973, ELECTRIC DICHROISM E
[8]  
JERNIGAN RL, 1976, MOL ELECTROOPTICS 1, P159
[9]  
LANCZOS C, 1957, APPLIED ANAL, pCH4
[10]   TRANSIENT ELECTRIC BIREFRINGENCE MEASUREMENTS OF THE ROTATIONAL AND INTERNAL MOTIONS OF A 1010 BASE PAIR DNA FRAGMENT - FIELD-STRENGTH AND PULSE LENGTH EFFECTS [J].
LEWIS, RJ ;
PECORA, R ;
EDEN, D .
MACROMOLECULES, 1987, 20 (10) :2579-2587