COMPUTER MODELING OF ELECTROSTATIC STEERING AND ORIENTATIONAL EFFECTS IN ANTIBODY-ANTIGEN ASSOCIATION

被引:67
作者
KOZACK, RE
DMELLO, MJ
SUBRAMANIAM, S
机构
[1] UNIV ILLINOIS, BECKMAN INST ADV SCI & TECHNOL, DEPT PHYSIOL & BIOPHYS, URBANA, IL 61801 USA
[2] UNIV ILLINOIS, NATL CTR SUPERCOMP APPLICAT, URBANA, IL 61801 USA
[3] THINKING MACHINES CORP, CAMBRIDGE, MA 02142 USA
关键词
D O I
10.1016/S0006-3495(95)80257-2
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Brownian dynamics simulations are performed to investigate the role of long-range electrostatic forces in the association of the monoclonal antibody HyHEL-5 with hen egg lysozyme. The electrostatic field of the antibody is obtained from a solution of the nonlinear Poisson-Boltzmann using the x-ray crystal coordinates of this protein. The lysozyme is represented as an asymmetric dumbbell consisting of two spheres of unequal size, an arrangement that allows for the modeling of the orientational requirements for docking. Calculations are done with the wild-type antibody and several point mutants at different ionic strengths. Changes in the charge distribution of the lysozyme are also considered. Results are compared with experiment and a simpler model in which the lysozyme is approximated by a single charged sphere.
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页码:807 / 814
页数:8
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