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NORMAL MODE TREATMENT OF OPTICAL-PROPERTIES OF A CLASSICAL COUPLED DIPOLE OSCILLATOR SYSTEM WITH LORENTZIAN BAND SHAPES
被引:79
作者
:
APPLEQUIST, J
论文数:
0
引用数:
0
h-index:
0
机构:
Department of Biochemistry and Biophysics, Iowa State University, Ames
APPLEQUIST, J
SUNDBERG, KR
论文数:
0
引用数:
0
h-index:
0
机构:
Department of Biochemistry and Biophysics, Iowa State University, Ames
SUNDBERG, KR
OLSON, ML
论文数:
0
引用数:
0
h-index:
0
机构:
Department of Biochemistry and Biophysics, Iowa State University, Ames
OLSON, ML
WEISS, LC
论文数:
0
引用数:
0
h-index:
0
机构:
Department of Biochemistry and Biophysics, Iowa State University, Ames
WEISS, LC
机构
:
[1]
Department of Biochemistry and Biophysics, Iowa State University, Ames
[2]
229 RB 1 PRC, Phillips Research Laboratories, Bartlesville
[3]
Department of Chemistry, Ohio University, Athens
来源
:
JOURNAL OF CHEMICAL PHYSICS
|
1979年
/ 70卷
/ 03期
关键词
:
D O I
:
10.1063/1.437616
中图分类号
:
O64 [物理化学(理论化学)、化学物理学];
学科分类号
:
070304 ;
081704 ;
摘要
:
DeVoe's classical coupled dipole oscillator model for molecular optical properties is specialized for the case where the individual oscillators have complex polarizabilities with Lorentzian band shapes. The optical properties of this system are derived in terms of a set of eigenvectors and eigenvalues which describe the normal modes of the system. When the real and imaginary parts of the interaction matrix can be diagonalized by the same transformation, the properties are expressed as explicit functions of frequency and do not require a matrix inversion at each frequency. This condition is met by a system in which all oscillators have the same bandwidth. For such a case the computation time is much less than that required by the more general method involving point-by-point matrix inversion. A further simplification is achieved for a system in which a subset of the oscillators have natural frequencies so high that their polarizabilities may be regarded as nondispersive. For this case the order of the eigenvalue problem is reduced to the number of dispersive oscillators. Sum rules are derived for the mixed dispersive/nondispersive system. The normal mode method is illustrated by calculations for a 12-residue right-handed α-helix in which oscillators at 52 000 and 67 600 cm -1 are assigned to each residue. The predicted absorption and circular dichroic spectra are similar to those predicted using Gaussian band shapes for the individual oscillators by the matrix inversion method, while a 40-fold saving in computer time was achieved by the normal mode method. © 1979 American Institute of Physics.
引用
收藏
页码:1240 / 1246
页数:7
相关论文
共 27 条
[1]
POLARIZABILITY THEORY OF OPTICAL-ROTATION
APPLEQUI.J
论文数:
0
引用数:
0
h-index:
0
机构:
IOWA STATE UNIV, DEPT BIOCHEM & BIOPHYS, AMES, IA 50010 USA
IOWA STATE UNIV, DEPT BIOCHEM & BIOPHYS, AMES, IA 50010 USA
APPLEQUI.J
[J].
JOURNAL OF CHEMICAL PHYSICS,
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ATOM DIPOLE INTERACTION MODEL FOR MOLECULAR POLARIZABILITY - APPLICATION TO POLYATOMIC-MOLECULES AND DETERMINATION OF ATOM POLARIZABILITIES
APPLEQUIST, J
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0
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0
h-index:
0
APPLEQUIST, J
CARL, JR
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0
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CARL, JR
FUNG, KK
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0
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FUNG, KK
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GENERALIZED SUSCEPTIBILITY THEORY .2. OPTICAL ABSORPTION PROPERTIES OF HELICAL POLYPEPTIDES
BARNES, DG
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0
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BARNES, DG
RHODES, W
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RHODES, W
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BECKER R, 1964, ELECTROMAGNETIC FIEL, V1, P233
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POLARIZED VACUUM-ULTRAVIOLET ABSORPTION OF POLY(L-ALANINE)
BENSING, JL
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BENSING, JL
PYSH, ES
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0
PYSH, ES
[J].
MACROMOLECULES,
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APPLICATION OF A NEW MODULATION METHOD FOR LINEAR DICHROISM STUDIES OF ORIENTED BIOPOLYMERS IN VACUUM ULTRAVIOLET
BRAHMS, J
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0
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0
BRAHMS, J
PILET, J
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0
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0
PILET, J
DAMANY, H
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0
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DAMANY, H
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CHANDRASEKHARAN, V
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POLYNUCLEOTIDE CIRCULAR-DICHROISM CALCULATIONS - USE OF AN ALL-ORDER CLASSICAL COUPLED OSCILLATOR POLARIZABILITY THEORY
CECH, CL
论文数:
0
引用数:
0
h-index:
0
机构:
UNIV CALIF,DEPT CHEM,BERKELEY,CA 94720
CECH, CL
HUG, W
论文数:
0
引用数:
0
h-index:
0
机构:
UNIV CALIF,DEPT CHEM,BERKELEY,CA 94720
HUG, W
TINOCO, I
论文数:
0
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h-index:
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机构:
UNIV CALIF,DEPT CHEM,BERKELEY,CA 94720
TINOCO, I
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BIOPOLYMERS,
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Ciardelli F., 1973, FUNDAMENTAL ASPECTS
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OPTICAL PROPERTIES OF MOLECULAR AGGREGATES .2. CLASSICAL THEORY OF REFRACTION ABSORPTION AND OPTICAL ACTIVITY OF SOLUTIONS AND CRYSTALS
DEVOE, H
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0
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0
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DEVOE, H
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JOURNAL OF CHEMICAL PHYSICS,
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THEORY OF HYPOCHROMISM OF BIOPOLYMERS - CALCULATED SPECTRA FOR DNA
DEVOE, H
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0
引用数:
0
h-index:
0
机构:
Laboratory of Neurochemistry, National Institute of Mental Health, Bethesda, Maryland
DEVOE, H
[J].
ANNALS OF THE NEW YORK ACADEMY OF SCIENCES,
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1
2
3
→
共 27 条
[1]
POLARIZABILITY THEORY OF OPTICAL-ROTATION
APPLEQUI.J
论文数:
0
引用数:
0
h-index:
0
机构:
IOWA STATE UNIV, DEPT BIOCHEM & BIOPHYS, AMES, IA 50010 USA
IOWA STATE UNIV, DEPT BIOCHEM & BIOPHYS, AMES, IA 50010 USA
APPLEQUI.J
[J].
JOURNAL OF CHEMICAL PHYSICS,
1973,
58
(10)
: 4251
-
4259
[2]
ATOM DIPOLE INTERACTION MODEL FOR MOLECULAR POLARIZABILITY - APPLICATION TO POLYATOMIC-MOLECULES AND DETERMINATION OF ATOM POLARIZABILITIES
APPLEQUIST, J
论文数:
0
引用数:
0
h-index:
0
APPLEQUIST, J
CARL, JR
论文数:
0
引用数:
0
h-index:
0
CARL, JR
FUNG, KK
论文数:
0
引用数:
0
h-index:
0
FUNG, KK
[J].
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY,
1972,
94
(09)
: 2952
-
+
[3]
GENERALIZED SUSCEPTIBILITY THEORY .2. OPTICAL ABSORPTION PROPERTIES OF HELICAL POLYPEPTIDES
BARNES, DG
论文数:
0
引用数:
0
h-index:
0
BARNES, DG
RHODES, W
论文数:
0
引用数:
0
h-index:
0
RHODES, W
[J].
JOURNAL OF CHEMICAL PHYSICS,
1968,
48
(02)
: 817
-
&
[4]
BECKER R, 1964, ELECTROMAGNETIC FIEL, V1, P233
[5]
POLARIZED VACUUM-ULTRAVIOLET ABSORPTION OF POLY(L-ALANINE)
BENSING, JL
论文数:
0
引用数:
0
h-index:
0
BENSING, JL
PYSH, ES
论文数:
0
引用数:
0
h-index:
0
PYSH, ES
[J].
MACROMOLECULES,
1971,
4
(05)
: 659
-
&
[6]
APPLICATION OF A NEW MODULATION METHOD FOR LINEAR DICHROISM STUDIES OF ORIENTED BIOPOLYMERS IN VACUUM ULTRAVIOLET
BRAHMS, J
论文数:
0
引用数:
0
h-index:
0
BRAHMS, J
PILET, J
论文数:
0
引用数:
0
h-index:
0
PILET, J
DAMANY, H
论文数:
0
引用数:
0
h-index:
0
DAMANY, H
CHANDRASEKHARAN, V
论文数:
0
引用数:
0
h-index:
0
CHANDRASEKHARAN, V
[J].
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,
1968,
60
(04)
: 1130
-
+
[7]
POLYNUCLEOTIDE CIRCULAR-DICHROISM CALCULATIONS - USE OF AN ALL-ORDER CLASSICAL COUPLED OSCILLATOR POLARIZABILITY THEORY
CECH, CL
论文数:
0
引用数:
0
h-index:
0
机构:
UNIV CALIF,DEPT CHEM,BERKELEY,CA 94720
CECH, CL
HUG, W
论文数:
0
引用数:
0
h-index:
0
机构:
UNIV CALIF,DEPT CHEM,BERKELEY,CA 94720
HUG, W
TINOCO, I
论文数:
0
引用数:
0
h-index:
0
机构:
UNIV CALIF,DEPT CHEM,BERKELEY,CA 94720
TINOCO, I
[J].
BIOPOLYMERS,
1976,
15
(01)
: 131
-
152
[8]
Ciardelli F., 1973, FUNDAMENTAL ASPECTS
[9]
OPTICAL PROPERTIES OF MOLECULAR AGGREGATES .2. CLASSICAL THEORY OF REFRACTION ABSORPTION AND OPTICAL ACTIVITY OF SOLUTIONS AND CRYSTALS
DEVOE, H
论文数:
0
引用数:
0
h-index:
0
DEVOE, H
[J].
JOURNAL OF CHEMICAL PHYSICS,
1965,
43
(09)
: 3199
-
&
[10]
THEORY OF HYPOCHROMISM OF BIOPOLYMERS - CALCULATED SPECTRA FOR DNA
DEVOE, H
论文数:
0
引用数:
0
h-index:
0
机构:
Laboratory of Neurochemistry, National Institute of Mental Health, Bethesda, Maryland
DEVOE, H
[J].
ANNALS OF THE NEW YORK ACADEMY OF SCIENCES,
1969,
158
(A1)
: 298
-
&
←
1
2
3
→