ANALYSIS OF FLUORESCENT PSEUDOMONADS BASED ON 23S RIBOSOMAL DNA-SEQUENCES

被引:13
作者
CHRISTENSEN, H
BOYE, M
POULSEN, LK
RASMUSSEN, OF
机构
[1] DTH, DEPT MICROBIOL, DK-2800 LYNGBY, DENMARK
[2] NATL ENVIRONM PROTECT AGCY, DEPT MARINE ECOL & MICROBIOL, DK-4000 ROSKILDE, DENMARK
关键词
D O I
10.1128/AEM.60.6.2196-2199.1994
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The regions from positions 1391 to 1545 and 1620 to 1865 (Escherichia call numbers) of the 23S ribosomal DNA sequences have been analyzed for a number of Pseudomonas fluorescens and P. putida isolates. Variability was observed only in three smaller regions from positions 1484 to 1508, 1531 to 1542, and 1714 to 1748, corresponding to helices 58, 59, and 63, respectively, where up to 53% dissimilarity was found. Sequence analysis did not allow clear distinctions among P. fluorescens biovars, P. chlororaphis, and P. putida biovar B.
引用
收藏
页码:2196 / 2199
页数:4
相关论文
共 17 条
  • [1] BARRETT EL, 1986, J GEN MICROBIOL, V132, P2709
  • [2] CHAMPION AB, 1980, J GEN MICROBIOL, V120, P485
  • [3] SUB-PARTS-PER-BILLION NITRATE METHOD - USE OF AN N2O-PRODUCING DENITRIFIER TO CONVERT NO3- OR (NO3-)-N-15 TO N2O
    CHRISTENSEN, S
    TIEDJE, JM
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1988, 54 (06) : 1409 - 1413
  • [4] MOLECULAR AND FUNCTIONAL-ANALYSIS OF THE TOL PLASMID PWWO FROM PSEUDOMONAS-PUTIDA AND CLONING OF GENES FOR THE ENTIRE REGULATED AROMATIC RING META-CLEAVAGE PATHWAY
    FRANKLIN, FCH
    BAGDASARIAN, M
    BAGDASARIAN, MM
    TIMMIS, KN
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1981, 78 (12): : 7458 - 7462
  • [5] Hartigan JohnA., 1975, CLUSTERING ALGORITHM
  • [6] Lane D. J., 1991, NUCL ACID TECHNOLOGI, P115
  • [7] RAPID-DETERMINATION OF 16S RIBOSOMAL-RNA SEQUENCES FOR PHYLOGENETIC ANALYSES
    LANE, DJ
    PACE, B
    OLSEN, GJ
    STAHL, DA
    SOGIN, ML
    PACE, NR
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1985, 82 (20) : 6955 - 6959
  • [8] THE RIBOSOMAL DATABASE PROJECT
    LARSEN, N
    OLSEN, GJ
    MAIDAK, BL
    MCCAUGHEY, MJ
    OVERBEEK, R
    MACKE, TJ
    MARSH, TL
    WOESE, CR
    [J]. NUCLEIC ACIDS RESEARCH, 1993, 21 (13) : 3021 - 3023
  • [9] PHYLOGENETIC STUDIES OF THE RIBOSOMAL-RNA GROUP-II PSEUDOMONADS BASED ON 16S RIBOSOMAL-RNA GENE-SEQUENCES
    LI, X
    DORSCH, M
    DELDOT, T
    SLY, LI
    STACKEBRANDT, E
    HAYWARD, AC
    [J]. JOURNAL OF APPLIED BACTERIOLOGY, 1993, 74 (03): : 324 - 329
  • [10] MCCABE PC, 1990, PCR PROTOCOLS GUIDE, P76