THERMODYNAMIC ANALYSIS OF THE STRUCTURAL STABILITY OF THE TETRAMERIC OLIGOMERIZATION DOMAIN OF P53 TUMOR-SUPPRESSOR

被引:113
作者
JOHNSON, CR
MORIN, PE
ARROWSMITH, CH
FREIRE, E
机构
[1] JOHNS HOPKINS UNIV,DEPT BIOL,BALTIMORE,MD 21218
[2] JOHNS HOPKINS UNIV,CTR BIOCALORIMETRY,BALTIMORE,MD 21218
[3] UNIV TORONTO,DEPT MED BIOPHYS,TORONTO,ON M4X 1K9,CANADA
[4] ONTARIO CANC INST,DIV MOLEC & STRUCT BIOL,TORONTO,ON M4X 1K9,CANADA
关键词
D O I
10.1021/bi00016a002
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The structural stability of an amino acid fragment containing the oligomerization domain (residues 303-366) of the tumor suppressor p53 has been studied using high-precision differential scanning calorimetry (DSC) and circular dichroism spectroscopy (CD). Previous NMR solution structural determinations have revealed that the fragment forms a symmetric 29.8 kDa tetramer composed of a dimer of dimers (p53tet) [Lee, W., Harvey, T. S., Yin, Y., Yau, P., Litchfield, D., & Arrowsmith, C. H. (1994) Nature Struct. Biol. 1, 877-890]. Thermal unfolding of the tetramer is reversible and can be described as a two-state transition in which the folded tetramer is converted directly to unfolded monomers (N-4 <----> 4U). According to the DSC and CD data, the population of intermediate species consisting of folded monomers or dimers is insignificant, indicating that isolated dimeric or monomeric structures have a much lower stability than the dimer and do not become Populated during thermal denaturation under the conditions studied. The transition temperature of unfolding is found to be highly dependent on protein concentration and to follow the expected behavior for a tetramer that dissociates upon unfolding. Experiments conducted at pH 4.0 in 25 mM sodium acetate at a tetramer concentration of 145.8 mu M have a transition temperature (T-m) of 75.3 degrees C while at 0.5 mu M the value drops to 39.2 degrees C. The enthalpy change of unfolding at 60 degrees C is 26 kcal (mol of monomer)(-1) with a heat capacity change of 387 cal (K.mol of monomer)(-1). The stability of p53tet is dependent on pH and salt concentration. Decreasing the pH from 7.0 to 3.0 lowered the stability of the tetramer significantly (T-m's of 84.5 and 34.3 degrees C, respectively) while higher salt concentrations increased the stability, especially at low pH values. The results of these studies indicate that the tetramer is stabilized primarily by intersubunit interactions rather than intrasubunit interactions. In fact, more than 58% of the total area buried from the solvent in the folded tetramer corresponds to the intersubunit interfaces, and 70% of this area is hydrophobic. These results emphasize the role of quaternary structure in the stabilization of small oligomeric proteins.
引用
收藏
页码:5309 / 5316
页数:8
相关论文
共 34 条
  • [1] BARGONETTI J, 1993, GENE DEV, P2565
  • [2] CRYSTAL-STRUCTURE OF A P53 TUMOR-SUPPRESSOR DNA COMPLEX - UNDERSTANDING TUMORIGENIC MUTATIONS
    CHO, YJ
    GORINA, S
    JEFFREY, PD
    PAVLETICH, NP
    [J]. SCIENCE, 1994, 265 (5170) : 346 - 355
  • [3] HIGH-RESOLUTION STRUCTURE OF THE OLIGOMERIZATION DOMAIN OF P53 BY MULTIDIMENSIONAL NMR
    CLORE, GM
    OMICHINSKI, JG
    SAKAGUCHI, K
    ZAMBRANO, N
    SAKAMOTO, H
    APPELLA, E
    GRONENBORN, AM
    [J]. SCIENCE, 1994, 265 (5170) : 386 - 391
  • [4] THE TUMOR-SUPPRESSOR P53
    DONEHOWER, LA
    BRADLEY, A
    [J]. BIOCHIMICA ET BIOPHYSICA ACTA, 1993, 1155 (02) : 181 - 205
  • [5] SETOR - HARDWARE-LIGHTED 3-DIMENSIONAL SOLID MODEL REPRESENTATIONS OF MACROMOLECULES
    EVANS, SV
    [J]. JOURNAL OF MOLECULAR GRAPHICS, 1993, 11 (02): : 134 - &
  • [6] FREIRE E, 1994, METHOD ENZYMOL, V240, P502
  • [7] STATISTICAL MECHANICAL DECONVOLUTION OF THERMAL TRANSITIONS IN MACROMOLECULES .1. THEORY AND APPLICATION TO HOMOGENEOUS SYSTEMS
    FREIRE, E
    BILTONEN, RL
    [J]. BIOPOLYMERS, 1978, 17 (02) : 463 - 479
  • [8] FREIRE E, 1989, COMMENTS MOL CELL BI, V6, P123
  • [9] CALCULATION OF PROTEIN EXTINCTION COEFFICIENTS FROM AMINO-ACID SEQUENCE DATA
    GILL, SC
    VONHIPPEL, PH
    [J]. ANALYTICAL BIOCHEMISTRY, 1989, 182 (02) : 319 - 326
  • [10] GOMEZ J, 1995, IN PRESS PROTEINS