TURNS IN SMALL CYCLIC-PEPTIDES - CAN INFRARED-SPECTROSCOPY DETECT AND DISCRIMINATE AMONGST THEM

被引:25
作者
SHAW, RA
PERCZEL, A
MANTSCH, HH
FASMAN, GD
机构
[1] NATL RES COUNCIL CANADA, INST BIODIAGNOST, WINNIPEG R3B 1Y6, MB, CANADA
[2] EOTVOS LORAND UNIV, DEPT ORGAN CHEM, H-1117 BUDAPEST, HUNGARY
[3] BRANDEIS UNIV, GRAD DEPT BIOCHEM, WALTHAM, MA 02254 USA
基金
美国国家科学基金会;
关键词
D O I
10.1016/0022-2860(94)08235-9
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Infrared spectra are reported in the amide I absorption region for some cyclic peptides of the general formula cyclo[epsilon-Aca-Pro-Xxx] (epsilon-Aca = epsilon-aminocaproyl; Xxx = Ala, Thr(OBz)) and the corresponding ''dimers'' cyclo[epsilon-Aca-Pro-Xxx-epsilon-Aca-Pro-Xxx] dissolved in D2O and acetonitrile. The acetonitrile solution spectra are very different from those measured in D2O. In particular, the D2O solution spectra exhibit amide I absorptions at exceptionally low frequencies (1595-1600 cm-1). The infrared spectra are interpreted as indicating an unusual D2O solution structure involving three-centered hydrogen bonding to the Aca carbonyl group, two amide protons interacting with the C=O group to simultaneously close both a gamma-turn and a beta-turn. The acetonitrile solution spectra are interpreted as reflecting hydrogen-bonding characteristics of a beta-turn, with certain compounds also showing absorptions that suggest the presence of other hydrogen-bonded (gamma-turn) conformers.
引用
收藏
页码:143 / 150
页数:8
相关论文
共 10 条
[1]   EXAMINATION OF THE SECONDARY STRUCTURE OF PROTEINS BY DECONVOLVED FTIR SPECTRA [J].
BYLER, DM ;
SUSI, H .
BIOPOLYMERS, 1986, 25 (03) :469-487
[2]   PROTEIN SECONDARY STRUCTURE FROM FT-IR SPECTROSCOPY - CORRELATION WITH DIHEDRAL ANGLES FROM 3-DIMENSIONAL RAMACHANDRAN PLOTS [J].
JACKSON, M ;
MANTSCH, HH .
CANADIAN JOURNAL OF CHEMISTRY-REVUE CANADIENNE DE CHIMIE, 1991, 69 (11) :1639-1642
[3]   VIBRATIONAL SPECTROSCOPY AND CONFORMATION OF PEPTIDES, POLYPEPTIDES, AND PROTEINS [J].
KRIMM, S ;
BANDEKAR, J .
ADVANCES IN PROTEIN CHEMISTRY, 1986, 38 :181-364
[4]   FOURIER-TRANSFORM METHODS FOR SPECTRAL RESOLUTION ENHANCEMENT [J].
MANTSCH, HH ;
MOFFATT, DJ ;
CASAL, HL .
JOURNAL OF MOLECULAR STRUCTURE, 1988, 173 :285-298
[5]   CHARACTERIZATION OF BETA-TURNS IN CYCLIC HEXAPEPTIDES IN SOLUTION BY FOURIER-TRANSFORM IR SPECTROSCOPY [J].
MANTSCH, HH ;
PERCZEL, A ;
HOLLOSI, M ;
FASMAN, GD .
BIOPOLYMERS, 1993, 33 (02) :201-207
[6]   CONFORMATIONAL-ANALYSIS OF PSEUDOCYCLIC HEXAPEPTIDES BASED ON QUANTITATIVE CIRCULAR-DICHROISM (CD), NOE, AND X-RAY DATA - THE PURE CD SPECTRA OF TYPE-I AND TYPE-II BETA-TURNS [J].
PERCZEL, A ;
HOLLOSI, M ;
FOXMAN, BM ;
FASMAN, GD .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1991, 113 (26) :9772-9784
[7]   TURNS IN PEPTIDES AND PROTEINS [J].
ROSE, GD ;
GIERASCH, LM ;
SMITH, JA .
ADVANCES IN PROTEIN CHEMISTRY, 1985, 37 :1-109
[8]   SOLVENT INFLUENCE ON THE CONFORMATION OF CYCLOSPORINE - AN FT-IR STUDY [J].
SHAW, RA ;
MANTSCH, HH ;
CHOWDHRY, BZ .
CANADIAN JOURNAL OF CHEMISTRY-REVUE CANADIENNE DE CHIMIE, 1993, 71 (09) :1334-1339
[9]   NEW INSIGHT INTO PROTEIN SECONDARY STRUCTURE FROM RESOLUTION-ENHANCED INFRARED-SPECTRA [J].
SUREWICZ, WK ;
MANTSCH, HH .
BIOCHIMICA ET BIOPHYSICA ACTA, 1988, 952 (02) :115-130
[10]   DETERMINATION OF PROTEIN SECONDARY STRUCTURE BY FOURIER-TRANSFORM INFRARED-SPECTROSCOPY - A CRITICAL-ASSESSMENT [J].
SUREWICZ, WK ;
MANTSCH, HH ;
CHAPMAN, D .
BIOCHEMISTRY, 1993, 32 (02) :389-394