Deoxycytidine kinase, purified from human leukemic spleen to apparent homogeneity, is a multisubstrate enzyme that also phosphorylates purine deoxyribonucleosides [Bohman & Eriksson (1988) Biochemistry 24258–4265]. In the present investigation we show that the stability and temperature dependence of dCyd kinase activity differed appreciably from the dAdo kinase activity of the same pure enzyme. Selective inactivation of dAdo activity was observed upon an incubation of the enzyme at both 4 and 37 °C. The half-life of dAdo activity at 4 °C increased from 36 to 84 h, when the protein concentration was increased by addition of bovine serum albumin. However, the half-life of dCyd activity increased from 72 h to more than 7 days under the same conditions. dCyd activity was stable for at least 6 h at 37 °C while the half-life of dAdo activity was 2 h. The presence of substrates like ATP, dTTP, or dAdo stabilized dAdo activity at both temperatures, and full maintenance of both activities at 37 °C was obtained by the addition of the zwitterionic detergent CHAPS. Furthermore, thermal inactivation of the dAdo activity occurred at a lower temperature (48 °C) as compared to the dCyd activity (54 °C). The presence of protease inhibitors had no effect on enzyme inactivation, nor was there a difference in the subunit structure of the selectively inactivated enzyme as compared to the fully active form, as revealed by size-exclusion chromatography. Unexpectedly, it was found that biological detergents like CHAPS and sodium cholate were competitive inhibitors of dAdo phosphorylation and weak stimulators of dCyd phosphorylation without changing the overall subunit structure of the enzyme. Our data can explain the varying substrate specificity reported for dCyd kinase in earlier studies and strongly suggest that the enzyme exists in different conformational state(s) with different substrate kinetic properties. © 1990, American Chemical Society. All rights reserved.