LOW RESOLUTION SOLUTION STRUCTURE OF THE BACILLUS-SUBTILIS GLUCOSE PERMEASE-IIA DOMAIN DERIVED FROM HETERONUCLEAR 3-DIMENSIONAL NMR-SPECTROSCOPY

被引:40
作者
FAIRBROTHER, WJ
GIPPERT, GP
REIZER, J
SAIER, MH
WRIGHT, PE
机构
[1] Scripps Res Inst, RES INST, DEPT MOLEC BIOL, LA JOLLA, CA 92037 USA
[2] UNIV CALIF SAN DIEGO, DEPT BIOL, LA JOLLA, CA 92093 USA
关键词
PHOSPHOENOLPYRUVATE-SUGAR PHOSPHOTRANSFERASE SYSTEM (PTS); GLUCOSE PERMEASE-IIAGLC DOMAIN; PROTEIN STRUCTURE; NUCLEAR MAGNETIC RESONANCE; DISTANCE GEOMETRY; BACILLUS-SUBTILIS;
D O I
10.1016/0014-5793(92)80367-P
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A low resolution solution structure of the IIA domain of the Bacillus subtilis phosphoenolpyruvate-sugar phosphotransferase system (PTS) glucose permease has been determined using 945 inter-residue and 724 intra-residue distance constraints derived from three-dimensional N-15 and C-13 edited NOESY spectra. A total of 15 structures was generated using distance geometry calculations. The protein is comprised of 13-beta-strands forming an antiparallel beta-barrel. The average backbone atomic RMS deviation about the average distance geometry structure for the beta-sheet residues is 1.1 angstrom. The conformations of the loop regions between the beta-strands are less well determined. Backbone distance constraints obtained during the process of sequential assignment were insufficient to correctly calculate the polypeptide fold.
引用
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页码:148 / 152
页数:5
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