COMMUNITY STRUCTURE OF A MICROBIAL MAT - THE PHYLOGENETIC DIMENSION

被引:127
作者
RISATTI, JB
CAPMAN, WC
STAHL, DA
机构
[1] ILLINOIS STATE GEOL SURVEY,MICROBIAL GEOCHEM LAB,CHAMPAIGN,IL 61820
[2] UNIV ILLINOIS,COLL VET MED,URBANA,IL 61801
关键词
SULFATE-REDUCING BACTERIA; 16S RIBOSOMAL-RNA; OLIGONUCLEOTIDE PROBES;
D O I
10.1073/pnas.91.21.10173
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Traditional studies of microbial communities are incomplete because of the inability to identify and quantify all contributing populations. In the present study, we directly determine the abundance and distribution of sulfate-reducing bacterial populations in a microbial mat community by using hybridization probes complementary to the 16S-like rRNAs of major phylogenetic groups. Most of the major groups were found in this single community, distributed for the most part in nonoverlapping depth intervals of the mat. The reflection of the phylogenetic structure in the community structure suggests that those species making up the major phylogenetic groups perform specific interrelated metabolic functions in the community. Comparison of population profiles to previously observed rates of sulfate reduction suggests there are additional populations of sulfate-reducing bacteria both within the photooxic zone and deeper in the mat.
引用
收藏
页码:10173 / 10177
页数:5
相关论文
共 24 条
[1]   MOLECULAR AND MICROSCOPIC IDENTIFICATION OF SULFATE-REDUCING BACTERIA IN MULTISPECIES BIOFILMS [J].
AMANN, RI ;
STROMLEY, J ;
DEVEREUX, R ;
KEY, R ;
STAHL, DA .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1992, 58 (02) :614-623
[2]   REMARKABLE ARCHAEAL DIVERSITY DETECTED IN A YELLOWSTONE-NATIONAL-PARK HOT-SPRING ENVIRONMENT [J].
BARNS, SM ;
FUNDYGA, RE ;
JEFFRIES, MW ;
PACE, NR .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1994, 91 (05) :1609-1613
[3]   BIOGEOCHEMICAL CYCLES OF CARBON, SULFUR, AND FREE OXYGEN IN A MICROBIAL MAT [J].
CANFIELD, DE ;
MARAIS, DJD .
GEOCHIMICA ET COSMOCHIMICA ACTA, 1993, 57 (16) :3971-3984
[4]   AEROBIC SULFATE REDUCTION IN MICROBIAL MATS [J].
CANFIELD, DE ;
DESMARAIS, DJ .
SCIENCE, 1991, 251 (5000) :1471-1473
[5]  
D'Amelio E.D., 1989, MICROBIAL MATS PHYSL, P97
[6]   PHYLOGENETIC STAINS - RIBOSOMAL RNA-BASED PROBES FOR THE IDENTIFICATION OF SINGLE CELLS [J].
DELONG, EF ;
WICKHAM, GS ;
PACE, NR .
SCIENCE, 1989, 243 (4896) :1360-1363
[7]   A LEAST-SQUARES ALGORITHM FOR FITTING ADDITIVE TREES TO PROXIMITY DATA [J].
DESOETE, G .
PSYCHOMETRIKA, 1983, 48 (04) :621-626
[8]   DIVERSITY AND ORIGIN OF DESULFOVIBRIO SPECIES - PHYLOGENETIC DEFINITION OF A FAMILY [J].
DEVEREUX, R ;
HE, SH ;
DOYLE, CL ;
ORKLAND, S ;
STAHL, DA ;
LEGALL, J ;
WHITMAN, WB .
JOURNAL OF BACTERIOLOGY, 1990, 172 (07) :3609-3619
[9]   GENUS-SPECIFIC AND GROUP-SPECIFIC HYBRIDIZATION PROBES FOR DETERMINATIVE AND ENVIRONMENTAL-STUDIES OF SULFATE-REDUCING BACTERIA [J].
DEVEREUX, R ;
KANE, MD ;
WINFREY, J ;
STAHL, DA .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 1992, 15 (04) :601-609
[10]   NATURAL RELATIONSHIPS AMONG SULFATE-REDUCING EUBACTERIA [J].
DEVEREUX, R ;
DELANEY, M ;
WIDDEL, F ;
STAHL, DA .
JOURNAL OF BACTERIOLOGY, 1989, 171 (12) :6689-6695