THE TRIPLE ISOTOPIC-SUBSTITUTION METHOD IN SMALL-ANGLE NEUTRON-SCATTERING - APPLICATION TO THE STUDY OF THE TERNARY COMPLEX EF-TU GTP AMINOACYL TRANSFER-RNA

被引:9
作者
SERDYUK, IN
PAVLOV, MY
RUBLEVSKAYA, IN
ZACCAI, G
LEBERMAN, R
机构
[1] INST BIOL STRUCT,F-38027 GRENOBLE 1,FRANCE
[2] EMBL OUTSTN,F-38042 GRENOBLE 9,FRANCE
关键词
NEUTRON SCATTERING; ISOTOPIC SUBSTITUTION; EF-TU GTP AMINOACYL-TRANSFER-RNA COMPLEX;
D O I
10.1016/0301-4622(94)00083-2
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The TIS (triple isotopic substitution) method in small angle neutron scattering was applied to determine the radius of gyration of polypeptide elongation factor Tu (EF-Tu) from E. coli associated with GDP and within the ternary complex EF-Tu.GTP .aminoacyl-tRNA. The results showed that, within errors of about 1 Angstrom, there is no change in the radius of gyration of the EF-Tu moiety upon ternary complex formation. Experiments were performed in H2O buffer, in which complex formation could be followed on an absolute scale because of the relatively large contrast of both protein and tRNA. The TIS method is based on the analysis of a scattering curve that is the difference between the scattering of two solutions containing appropriately deuterium labelled particles. A necessary condition for the application of the method is that the two solutions are identical in all respects except for the extent of deuterium label. The main properties of TIS that make it very useful for the study of complex particles in solution were confirmed by this study. These are the elimination of interparticle effects in the difference curve, the 'invisibility' of unlabelled parts of the particles and the independence of the difference scattering curve on the buffer (H2O)-H-2-H2O content. The last property is of particular interest for the study of interactions that may be influenced by (H2O)-H-2, since, contrary to classical contrast variation methods, TIS experiments can be performed in H2O buffer alone.
引用
收藏
页码:123 / 130
页数:8
相关论文
共 24 条
[1]   MEASUREMENT OF SINGLE CHAIN NEUTRON-SCATTERING IN CONCENTRATED POLYMER-SOLUTIONS [J].
AKCASU, AZ ;
SUMMERFIELD, GC ;
HAN, CC ;
KIM, CY ;
YU, H .
JOURNAL OF POLYMER SCIENCE PART B-POLYMER PHYSICS, 1980, 18 (04) :863-869
[2]  
ANTONSSON B, 1968, BIOCHEMISTRY-US, V25, P3655
[3]   STUDIES ON POLYPEPTIDE ELONGATION FACTORS FROM ESCHERICHIA-COLI .3. MOLECULAR CHARACTERISTICS OF EF-TU-GUANOSINE DIPHOSPHATE, EF-TS, AND EF-TU-TS COMPLEX [J].
ARAI, K ;
KAWAKITA, M ;
KAZIRO, Y ;
KONDO, T ;
UI, N .
JOURNAL OF BIOCHEMISTRY, 1973, 73 (05) :1095-1105
[4]   CRYSTAL-STRUCTURE OF ACTIVE ELONGATION-FACTOR TU REVEALS MAJOR DOMAIN REARRANGEMENTS [J].
BERCHTOLD, H ;
RESHETNIKOVA, L ;
REISER, COA ;
SCHIRMER, NK ;
SPRINZL, M ;
HILGENFELD, R .
NATURE, 1993, 365 (6442) :126-132
[5]   POSITIONS OF S2, S13, S16, S17, S19 AND S21 IN THE 30-S-RIBOSOMAL SUBUNIT OF ESCHERICHIA-COLI [J].
CAPEL, MS ;
KJELDGAARD, M ;
ENGELMAN, DM ;
MOORE, PB .
JOURNAL OF MOLECULAR BIOLOGY, 1988, 200 (01) :65-87
[6]   NEW METHOD FOR DETERMINATION OF BIOLOGICAL QUARTERNARY STRUCTURE BY NEUTRON-SCATTERING [J].
ENGELMAN, DM ;
MOORE, PB .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1972, 69 (08) :1997-&
[7]   MEASUREMENT OF THE RADII OF GYRATION OF RIBOSOMAL COMPONENTS INSITU BY NEUTRON-SCATTERING [J].
HARRISON, DH ;
MAY, RP ;
MOORE, PB .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1993, 26 (pt 2) :198-206
[8]   SEPARATION OF TRANSFER RIBONUCLEIC-ACID BY SEPHAROSE CHROMATOGRAPHY USING REVERSE SALT GRADIENTS [J].
HOLMES, WM ;
HURD, RE ;
REID, BR ;
RIMERMAN, RA ;
HATFIELD, GW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1975, 72 (03) :1068-1071
[9]   LABEL TRIANGULATION METHOD AND MIXED ISOMORPHOUS REPLACEMENT PRINCIPLE [J].
HOPPE, W .
JOURNAL OF MOLECULAR BIOLOGY, 1973, 78 (03) :581-585
[10]  
IBEL K, 1976, J APPL CRYSTALLOGR, V9, P630