CRISPR-Cas9 Genome Editing of Primary Human Vascular Cells In Vitro

被引:3
作者
Atri, Deepak S. [1 ,2 ,3 ]
Lee-Kim, Vivian S. [1 ,2 ,3 ]
Vellarikkal, Shamsudheen K. [1 ,2 ,3 ]
Sias-Garcia, Oscar [1 ,2 ,3 ]
Yanamandala, Mounica [1 ,2 ,3 ]
Schniztler, Gavin R. [1 ,2 ,3 ]
Gupta, Rajat M. [1 ,2 ,3 ]
机构
[1] Brigham & Womens Hosp, Div Cardiovasc Med, 75 Francis St, Boston, MA 02115 USA
[2] Brigham & Womens Hosp, Dept Genet, 75 Francis St, Boston, MA 02115 USA
[3] Broad Inst MIT & Harvard, Cambridge, MA 02142 USA
来源
CURRENT PROTOCOLS | 2021年 / 1卷 / 11期
关键词
CRISPR; Cas9; endothelial cells; genome editing; vascular smooth muscle cells;
D O I
10.1002/cpz1.291
中图分类号
Q5 [生物化学];
学科分类号
070307 [化学生物学];
摘要
Genome editing of primary human cells with CRISPR-Cas9 is a powerful tool to study gene function. For many cell types, there are efficient protocols for editing with optimized plasmids for Cas9 and sgRNA expression. Vascular cells, however, remain refractory to plasmid-based delivery of CRISPR machinery for in vitro genome editing due to low transfection efficiency, poor expression of the Cas9 machinery, and toxic effects of the selection antibiotics. Here, we describe a method for high-efficiency editing of primary human vascular cells in vitro using nucleofection for direct delivery of sgRNA:Cas9-NLS ribonucleoprotein complexes. This method is more rapid and its high editing efficiency eliminates the need for additional selection steps. The edited cells can be employed in diverse applications, such as gene expression measurement or functional assays to assess various genetic perturbation effects in vitro. This method proves effective in vascular cells that are refractory to standard genome manipulation techniques using viral plasmid delivery. We anticipate that this technique will be applied to other non-vascular cell types that face similar barriers to efficient genome editing. (c) 2021 Wiley Periodicals LLC.
引用
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页数:10
相关论文
共 13 条
[1]
[Anonymous], 2014, Tracking Indels by Decomposition (TIDE)
[2]
[Anonymous], Synthego CRISPR Resources
[3]
[Anonymous], About Us
[4]
[Anonymous], Amaxa 4DNucleofector Protocol for THP1 ATCC For 4DNucleofector X Unit Transfection in suspension
[5]
Inherited causes of clonal haematopoiesis in 97,691 whole genomes [J].
Bick, Alexander G. ;
Weinstock, Joshua S. ;
Nandakumar, Satish K. ;
Fulco, Charles P. ;
Bao, Erik L. ;
Zekavat, Seyedeh M. ;
Szeto, Mindy D. ;
Liao, Xiaotian ;
Leventhal, Matthew J. ;
Nasser, Joseph ;
Chang, Kyle ;
Laurie, Cecelia ;
Burugula, Bala Bharathi ;
Gibson, Christopher J. ;
Lin, Amy E. ;
Taub, Margaret A. ;
Aguet, Francois ;
Ardlie, Kristin ;
Mitchell, Braxton D. ;
Barnes, Kathleen C. ;
Moscati, Arden ;
Fornage, Myriam ;
Redline, Susan ;
Psaty, Bruce M. ;
Silverman, Edwin K. ;
Weiss, Scott T. ;
Palmer, Nicholette D. ;
Vasan, Ramachandran S. ;
Burchard, Esteban G. ;
Kardia, Sharon L. R. ;
He, Jiang ;
Kaplan, Robert C. ;
Smith, Nicholas L. ;
Arnett, Donna K. ;
Schwartz, David A. ;
Correa, Adolfo ;
de Andrade, Mariza ;
Guo, Xiuqing ;
Konkle, Barbara A. ;
Custer, Brian ;
Peralta, Juan M. ;
Gui, Hongsheng ;
Meyers, Deborah A. ;
McGarvey, Stephen T. ;
Chen, Ida Yii-Der ;
Shoemaker, M. Benjamin ;
Peyser, Patricia A. ;
Broome, Jai G. ;
Gogarten, Stephanie M. ;
Wang, Fei Fei .
NATURE, 2020, 586 (7831) :763-+
[6]
Easy quantitative assessment of genome editing by sequence trace decomposition [J].
Brinkman, Eva K. ;
Chen, Tao ;
Amendola, Mario ;
van Steensel, Bas .
NUCLEIC ACIDS RESEARCH, 2014, 42 (22)
[7]
Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9 [J].
Doench, John G. ;
Fusi, Nicolo ;
Sullender, Meagan ;
Hegde, Mudra ;
Vaimberg, Emma W. ;
Donovan, Katherine F. ;
Smith, Ian ;
Tothova, Zuzana ;
Wilen, Craig ;
Orchard, Robert ;
Virgin, Herbert W. ;
Listgarten, Jennifer ;
Root, David E. .
NATURE BIOTECHNOLOGY, 2016, 34 (02) :184-+
[8]
CRISPR-Cas9 Gene Editing for Sickle Cell Disease and β-Thalassemia [J].
Frangoul, H. ;
Altshuler, D. ;
Cappellini, M. D. ;
Chen, Y-S ;
Domm, J. ;
Eustace, B. K. ;
Foell, J. ;
de la Fuente, J. ;
Grupp, S. ;
Handgretinger, R. ;
Ho, T. W. ;
Kattamis, A. ;
Kernytsky, A. ;
Lekstrom-Himes, J. ;
Li, A. M. ;
Locatelli, F. ;
Mapara, M. Y. ;
de Montalembert, M. ;
Rondelli, D. ;
Sharma, A. ;
Sheth, S. ;
Soni, S. ;
Steinberg, M. H. ;
Wall, D. ;
Yen, A. ;
Corbacioglu, S. .
NEW ENGLAND JOURNAL OF MEDICINE, 2021, 384 (03) :252-260
[9]
CRISPR-Cas9 In Vivo Gene Editing for Transthyretin Amyloidosis [J].
Gillmore, Julian D. ;
Gane, Ed ;
Taubel, Jorg ;
Kao, Justin ;
Fontana, Marianna ;
Maitland, Michael L. ;
Seitzer, Jessica ;
O'Connell, Daniel ;
Walsh, Kathryn R. ;
Wood, Kristy ;
Phillips, Jonathan ;
Xu, Yuanxin ;
Amaral, Adam ;
Boyd, Adam P. ;
Cehelsky, Jeffrey E. ;
McKee, Mark D. ;
Schiermeier, Andrew ;
Harari, Olivier ;
Murphy, Andrew ;
Kyratsous, Christos A. ;
Zambrowicz, Brian ;
Soltys, Randy ;
Gutstein, David E. ;
Leonard, John ;
Sepp-Lorenzino, Laura ;
Lebwohl, David .
NEW ENGLAND JOURNAL OF MEDICINE, 2021, 385 (06) :493-502
[10]
Hsiau, 2018, Inference of CRISPR Edits: ICE analysis