Identification and Expression Analysis of EST-based Genes in the Bud of Lycoris longituba

被引：2

作者：

Yonglan Cui Xinye Zhang Yan Zhou Hong Yu Lin Tao Lu Zhang Jian Zhou Qiang Zhuge Youming Cad and Minren HuangKey Laboratory of Tree Genetic Engineering of Nanjing Forestry University Nanjing China ^{[210037
]}

Hangzhou Genomics Institute James D Watson Institute of Genome Sciences Zhejiang UniversityKey Laboratory of Bioinformatics of Zhejiang Province Hangzhou China ^{[310008
]}

Department of Forestry Jiangxi Agriculture University Nanchang China ^{[330045
]}

Shanghai Municipal Agricultural Commission Shanghai China ^{[200003
]}

机构：

来源：

Genomics Proteomics & Bioinformatics | 2004年 / 01期

关键词：

Lycoris longituba; EST;

D O I：

暂无

中图分类号：

Q786 [基因的表达];

学科分类号：

071007 ; 0836 ; 090102 ;

摘要：

<正> To obtain a primary overview of gene diversity and expression pattern in Lycoris longituba, 4,992 ESTs (Expressed Sequence Tags) from L. longituba bud were se-quenced and 4,687 cleaned ESTs were used for gene expression analysis. Clustered by the PHRAP program, 967 contigs and 1,343 singlets were obtained. Blast search showed that 179 contigs and 227 singlets (totally 1,066 ESTs) had homologues in GenBank and 3,621 ESTs were novel.

引用

页码：43 / 46

页数：4

共 3 条

[1] Gene Expression Profiling in Porcine Fetal Thymus [J].

Yanjiong Chen Shengbin Li Lin Ye Jianing Geng Yajun Deng and Songnian Hu The State Laboratory of the Ministry of Health for Forensic Science Medical College of Xian Jiaotong University Xian ChinaBeijing Genomics Institute Beijing ChinaHangzhou Genomics Institute Hangzhou China .

Genomics Proteomics & Bioinformatics, 2003, (02) :171-172

[2]

Gene Identification and Expression Analysis of 86,136 Expressed Sequence Tags(EST)from the Rice Genome[J]. Michael G.Walker.Genomics Proteomics & Bioinformatics. 2003(01)

[3]

A unique set of 11,008 onion expressed sequence tags reveals expressed sequence and genomic differences between the monocot orders Asparagales and Poales .2 Kuhl,JC,Cheung,F,Yuan,Q,Martin,W,Zewdie,Y,McCallum,J,Catanach,A,Rutherford,P,Sink,KC,Jenderek,M,Prince,JP,Town,CD,Havey,MJ. Plant Cell . 2004

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