微滴数字PCR定量检测全血样品中结核分枝杆菌特异CFP10基因

被引:7
作者
宋能 [1 ]
谭杨 [1 ]
罗凤玲 [1 ]
关清 [1 ]
闫明哲 [2 ]
潘勤 [1 ]
章晓联 [1 ]
机构
[1] 武汉大学病毒学国家重点实验室/湖北省过敏及免疫相关疾病重点实验室/武汉大学医学研究院/武汉大学基础医学院免疫学系
[2] 武汉市医疗救治中心
基金
国家杰出青年科学基金;
关键词
微滴数字PCR; 结核分枝杆菌; 定量检测; CFP10;
D O I
暂无
中图分类号
R52 [结核病]; R440 [];
学科分类号
摘要
目的采用微滴数字PCR技术(droplet digital PCR,dd PCR)检测全血中结核分枝杆菌特异性CFP10(10-k Da culture filtrate protein,CFP10)基因的拷贝数含量。方法收集10例活动性肺结核患者(active tuberculosis,a TB)、10例肺外结核患者(extrapulmonary tuberculosis,EPTB)和5例健康对照者(healthy donars,HDs)全血并提取DNA,优化引物最佳扩增条件并制定重组质粒标准曲线,对样本中CFP10基因的拷贝数含量分别用dd PCR与实时定量PCR(quantitative real-time PCR,q PCR)进行检测和比较。结果对重组质粒的灵敏度检测显示dd PCR技术明显优于q PCR技术。对样本的检测显示q PCR技术检测a TB、EPTB患者与健康人的全血中CFP10含量之间无统计学意义;但是dd PCR技术检测a TB、EPTB患者与健康人之间有显著统计学意义(P<0.0001);dd PCR检测a TB和EPTB患者(共20例)CFP10基因绝对定量的浓度约为3.4~94.0 copies/μL。结论本研究首次报道采用dd PCR技术能灵敏地用于TB患者全血的诊断。
引用
收藏
页码:10 / 15
页数:6
相关论文
共 13 条
  • [1] 2000年全国结核病流行病学抽样调查报告
    全国结核病流行病学抽样调查技术指导组
    [J]. 中国防痨杂志, 2002, (02) : 3 - 46
  • [2] Next Generation Digital PCR Measurement of Hepatitis B Virus Copy Number in Formalin-Fixed Paraffin-Embedded Hepatocellular Carcinoma Tissue
    Huang, Jing-Tao
    Liu, Ying-Juan
    Wang, Jin
    Xu, Zhi-Gao
    Yang, Ying
    Shen, Fan
    Liu, Xing-hui
    Zhou, Xin
    Liu, Song-Mei
    [J]. CLINICAL CHEMISTRY, 2015, 61 (01) : 290 - 296
  • [3] Droplet digital PCR as a useful tool for the quantitative detection of Enterovirus 71[J] . Yan Long Edmund Lui,Eng Lee Tan.Journal of Virological Methods . 2014
  • [4] Optimising droplet digital PCR analysis approaches for detection and quantification of bacteria: a case study of fire blight and potato brown rot[J] . Tanja Dreo,Manca Pirc,?iva,Ram?ak,Jernej Pav?i?,Mojca Milavec,Jana ?el,Kristina Gruden.Analytical and Bioanalytical Chemistry . 2014 (26)
  • [5] Comparison of next-generation droplet digital PCR (ddPCR) with quantitative PCR (qPCR) for enumeration of Cryptosporidium oocysts in faecal samples[J] . Rongchang Yang,Andrea Paparini,Paul Monis,Una Ryan.International Journal for Parasitology . 2014
  • [6] Digital droplet PCR (ddPCR) for the precise quantification of human T-lymphotropic virus 1 proviral loads in peripheral blood and cerebrospinal fluid of HAM/TSP patients and identification of viral mutations
    Brunetto, Giovanna S.
    Massoud, Raya
    Leibovitch, Emily C.
    Caruso, Breanna
    Johnson, Kory
    Ohayon, Joan
    Fenton, Kaylan
    Cortese, Irene
    Jacobson, Steven
    [J]. JOURNAL OF NEUROVIROLOGY, 2014, 20 (04) : 341 - 351
  • [7] Identification of Chromosomally Integrated Human Herpesvirus 6 by Droplet Digital PCR
    Sedlak, Ruth Hall
    Cook, Linda
    Huang, Meei-Li
    Magaret, Amalia
    Zerr, Danielle M.
    Boeckh, Michael
    Jerome, Keith R.
    [J]. CLINICAL CHEMISTRY, 2014, 60 (05) : 765 - 772
  • [8] Low copy target detection by Droplet Digital PCR through application of a novel open access bioinformatic pipeline, ‘definetherain’[J] . Mathew Jones,James Williams,Kathleen Gartner,Rodney Phillips,Jacob Hurst,John Frater.Journal of Virological Methods . 2014
  • [9] Specific qPCR assays for the detection of orf virus, pseudocowpox virus and bovine papular stomatitis virus[J] . Hui Zhao,Kimberly Wilkins,Inger K. Damon,Yu Li.Journal of Virological Methods . 2013 (1-2)
  • [10] Viral diagnostics in the era of digital polymerase chain reaction
    Sedlak, Ruth Hall
    Jerome, Keith R.
    [J]. DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 2013, 75 (01) : 1 - 4