利用4个姊妹近等基因系群体定位水稻粒重和粒形QTL

被引:23
作者
姚国新 [1 ,2 ]
李金杰 [1 ]
张强 [1 ,3 ]
胡广隆 [1 ]
陈超 [1 ]
汤波 [1 ]
张洪亮 [1 ]
李自超 [1 ]
机构
[1] 中国农业大学农业部作物基因组与遗传改良重点实验室/北京市作物遗传改良重点实验室
[2] 孝感学院生命科学技术学院
[3] 吉林省农业科学院水稻研究所
基金
国家高技术研究发展计划(863计划);
关键词
水稻; 姊妹近等基因系; 粒重; 粒形; QTL;
D O I
暂无
中图分类号
S511 [稻];
学科分类号
0901 ;
摘要
粒重是决定水稻产量的三要素之一。利用世界上粒重最大的品种之一SLG-1(供体亲本)与小粒品种日本晴(Nipponbare,轮回亲本)杂交,在各回交世代选择粒重较大单株与日本晴回交,构建水稻粒重和粒形的姊妹近等基因系(SNILs)。对获得的73株BC4F1单株进行粒重频率分布统计,选择粒重频率分布在4个峰值处的代表性单株,自交获得4个BC4F2SNILs群体。利用BSA法(分离群体分组混合分析法),从均匀分布在水稻染色体上的1513对SSR标记中筛选出与粒重和粒形相关的多态性标记19对,以LOD≥2.5作为选择阈值,对粒重、粒长、粒宽和粒厚进行QTL扫描,共检测到6个区域的12个QTL,贡献率从7.22%到53.38%。这些QTL所在区域包含已克隆的粒长GS3和粒宽GW2,也包含没有精细定位的第2染色体的RM6318~RM1367、第3染色体的RM5477~RM6417和第6染色体的RM3370~RM1161等3个区域控制粒重和粒形的5个QTL。其中第3染色体上RM5477~RM6417区间存在粒形贡献率较大的新的QTL。构建含有这些粒重QTL的姊妹近等基因系,为进一步精细定位或克隆新的粒重或粒形QTL奠定了基础。
引用
收藏
页码:1310 / 1317
页数:8
相关论文
共 10 条
[1]   水稻大粒种质资源和遗传分析 [J].
马丽莲 ;
郭龙彪 ;
钱前 .
植物学通报, 2006, (04) :395-401
[2]  
Fine mapping of a yield-enhancing QTL cluster associated with transgressive variation in an Oryza sativa × O. rufipogon cross[J] . Xiaobo Xie,Fengxue Jin,Mi-Hee Song,Jung-Pil Suh,Hung-Goo Hwang,Yeon-Gyu Kim,Susan R. McCouch,Sang-Nag Ahn.Theoretical and Applied Genetics . 2008 (5)
[3]   Mapping QTLs with digenic epistasis under multiple environments and predicting heterosis based on QTL effects [J].
Gao, Yong-Ming ;
Zhu, Jun .
THEORETICAL AND APPLIED GENETICS, 2007, 115 (03) :325-333
[4]   Fine mapping of a grain weight quantitative trait locus on rice chromosome 8 using near-isogenic lines derived from a cross between Oryza sativa and Oryza rufipogon [J].
Xie, Xiaobo ;
Song, Mi-Hee ;
Jin, Fengxue ;
Ahn, Sang-Nag ;
Suh, Jung-Pil ;
Hwang, Hung-Goo ;
McCouch, S. R. .
THEORETICAL AND APPLIED GENETICS, 2006, 113 (05) :885-894
[5]   Challenges for meeting the global food and nutrient needs in the new millennium [J].
Khush, GS .
PROCEEDINGS OF THE NUTRITION SOCIETY, 2001, 60 (01) :15-26
[6]  
Mapping and genome organization of microsatellite sequences in rice (Oryza sativa L.)[J] . S. Temnykh,William D. Park,Nicola Ayres,Sam Cartinhour,N. Hauck,L. Lipovich,Y. G. Cho,T. Ishii,S. R. McCouch.TAG Theoretical and Applied Genetics . 2000 (5)
[7]  
Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)[J] . X. Chen,S. Temnykh,Y. Xu,Y. G. Cho,S. R. McCouch.TAG Theoretical and Applied Genetics . 1997 (4)
[8]  
Development of microsatellite markers and characterization of simple sequence length polymorphism (SSLP) in rice ( Oryza sativa L.)[J] . O. Panaud,X. Chen,S. R. McCouch.MGG Molecular & General Genetics . 1996 (5)
[9]   MOLECULAR MAPPING OF RICE CHROMOSOMES [J].
MCCOUCH, SR ;
KOCHERT, G ;
YU, ZH ;
WANG, ZY ;
KHUSH, GS ;
COFFMAN, WR ;
TANKSLEY, SD .
THEORETICAL AND APPLIED GENETICS, 1988, 76 (06) :815-829
[10]  
Productivity improvements in rice. Khush G S. Nutrition Reviews . 2003