Estimation of the number of authentic orphan genes in bacterial genomes

被引：5

作者：

Fukuchi, S

Nishikawa, K

机构：

[1] Natl Inst Genet, Ctr Informat Biol, Shizuoka 4118540, Japan

[2] Natl Inst Genet, DNA Data Bank Japan, Shizuoka 4118540, Japan

来源：

DNA RESEARCH | 2004年 / 11卷 / 04期

关键词：

D O I：

10.1093/dnares/11.4.311

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

引用

页码：311 / 313

页数：3

共 37 条

[1] Genome sequence of the endocellular obligate symbiont of tsetse flies, Wigglesworthia glossinidia
Akman, L
Yamashita, A
Watanabe, H
Oshima, K
Shiba, T
Hattori, M
Aksoy, S
[J]. NATURE GENETICS, 2002, 32 (03) : 402 - 407
[2] Reverse transcriptase-polymerase chain reaction validation of 25 "orphan" genes from Escherichia coli K-12 MG1655
Alimi, JP
Poirot, O
Lopez, F
Claverie, JM
[J]. GENOME RESEARCH, 2000, 10 (07) : 959 - 966
[3] Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori
Alm, RA
Ling, LSL
Moir, DT
King, BL
Brown, ED
Doig, PC
Smith, DR
Noonan, B
Guild, BC
deJonge, BL
Carmel, G
Tummino, PJ
Caruso, A
Uria-Nickelsen, M
Mills, DM
Ives, C
Gibson, R
Merberg, D
Mills, SD
Jiang, Q
Taylor, DE
Vovis, GF
Trost, TJ
[J]. NATURE, 1999, 397 (6715) : 176 - 180
[4] Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Altschul, SF
Madden, TL
Schaffer, AA
Zhang, JH
Zhang, Z
Miller, W
Lipman, DJ
[J]. NUCLEIC ACIDS RESEARCH, 1997, 25 (17) : 3389 - 3402
[5] The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000
Bairoch, A
Apweiler, R
[J]. NUCLEIC ACIDS RESEARCH, 2000, 28 (01) : 45 - 48
[6] The complete genome sequence of Escherichia coli K-12
Blattner, FR
Plunkett, G
Bloch, CA
Perna, NT
Burland, V
Riley, M
ColladoVides, J
Glasner, JD
Rode, CK
Mayhew, GF
Gregor, J
Davis, NW
Kirkpatrick, HA
Goeden, MA
Rose, DJ
Mau, B
Shao, Y
[J]. SCIENCE, 1997, 277 (5331) : 1453 - +
[7] Structural and genomic correlates of hyperthermostability
Cambillau, C
Claverie, JM
[J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2000, 275 (42) : 32383 - 32386
[8] Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii
Carlton, JM
Angiuoli, SV
Suh, BB
Kooij, TW
Pertea, M
Silva, JC
Ermolaeva, MD
Allen, JE
Selengut, JD
Koo, HL
Peterson, JD
Pop, M
Kosack, DS
Shumway, MF
Bidwell, SL
Shallom, SJ
van Aken, SE
Riedmuller, SB
Feldblyum, TV
Cho, JK
Quackenbush, J
Sedegah, M
Shoaibi, A
Cummings, LM
Florens, L
Yates, JR
Raine, JD
Sinden, RE
Harris, MA
Cunningham, DA
Preiser, PR
Bergman, LW
Vaidya, AB
Van Lin, LH
Janse, CJ
Waters, AP
Smith, HO
White, OR
Salzberg, SL
Venter, JC
Fraser, CM
Hoffman, SL
Gardner, MJ
Carucci, DJ
[J]. NATURE, 2002, 419 (6906) : 512 - 519
[9] The complete genome sequence of the murine respiratory pathogen Mycoplasma pulmonis
Chambaud, I
Heilig, R
Ferris, S
Barbe, V
Samson, D
Galisson, F
Moszer, I
Dybvig, K
Wróblewski, H
Viari, A
Rocha, EPC
Blanchard, A
[J]. NUCLEIC ACIDS RESEARCH, 2001, 29 (10) : 2145 - 2153
[10] Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
Cole, ST
Brosch, R
Parkhill, J
Garnier, T
Churcher, C
Harris, D
Gordon, SV
Eiglmeier, K
Gas, S
Barry, CE
Tekaia, F
Badcock, K
Basham, D
Brown, D
Chillingworth, T
Connor, R
Davies, R
Devlin, K
Feltwell, T
Gentles, S
Hamlin, N
Holroyd, S
Hornby, T
Jagels, K
Krogh, A
McLean, J
Moule, S
Murphy, L
Oliver, K
Osborne, J
Quail, MA
Rajandream, MA
Rogers, J
Rutter, S
Seeger, K
Skelton, J
Squares, R
Squares, S
Sulston, JE
Taylor, K
Whitehead, S
Barrell, BG
[J]. NATURE, 1998, 393 (6685) : 537 - +

← 1 2 3 4 →