Variation of the energy landscape of a small peptide under a change from the ECEPP/2 force field to ECEPP/3

被引:35
作者
Eisenmenger, F
Hansmann, UHE
机构
[1] HUMBOLDT UNIV BERLIN,FAC MED CHARITE,INST BIOCHEM,D-10115 BERLIN,GERMANY
[2] ETH ZURICH,SWISS CTR SCI COMP,CH-8092 ZURICH,SWITZERLAND
来源
JOURNAL OF PHYSICAL CHEMISTRY B | 1997年 / 101卷 / 16期
关键词
D O I
10.1021/jp963014t
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The multicanonical ansatz is used to study variations in the energy landscape of a small peptide, Met-enkephalin, under a change from the ECEPP/2 force field to ECEPP/3. Local minima with energies up to 5 kcal/mol higher than the global minima are sampled and classified according to H-bridges and backbone angles. The distribution and relative weight fur various temperatures of the minima an calculated and compared for the two force fields. We demonstrate that while there are small differences in the energy landscape our results at relevant temperatures are robust under changes between ECEPP/2 to ECEPP/3.
引用
收藏
页码:3304 / 3310
页数:7
相关论文
共 31 条
[1]   GROUND-STATE PROPERTIES OF THE 3-DIMENSIONAL ISING SPIN-GLASS [J].
BERG, BA ;
HANSMANN, UE ;
CELIK, T .
PHYSICAL REVIEW B, 1994, 50 (22) :16444-16452
[2]   NEW APPROACH TO SPIN-GLASS SIMULATIONS [J].
BERG, BA ;
CELIK, T .
PHYSICAL REVIEW LETTERS, 1992, 69 (15) :2292-2295
[3]   MULTICANONICAL ALGORITHMS FOR 1ST ORDER PHASE-TRANSITIONS [J].
BERG, BA ;
NEUHAUS, T .
PHYSICS LETTERS B, 1991, 267 (02) :249-253
[4]   MULTICANONICAL STUDY OF THE 3D ISING SPIN-GLASS [J].
BERG, BA ;
CELIK, T ;
HANSMANN, U .
EUROPHYSICS LETTERS, 1993, 22 (01) :63-68
[5]   PROPERTIES OF INTERFACES IN THE 2 AND 3-DIMENSIONAL ISING-MODEL [J].
BERG, BA ;
HANSMANN, U ;
NEUHAUS, T .
ZEITSCHRIFT FUR PHYSIK B-CONDENSED MATTER, 1993, 90 (02) :229-239
[6]   SIMULATION OF AN ENSEMBLE WITH VARYING MAGNETIC-FIELD - A NUMERICAL DETERMINATION OF THE ORDER-ORDER INTERFACE TENSION IN THE D=2 ISING-MODEL [J].
BERG, BA ;
HANSMANN, U ;
NEUHAUS, T .
PHYSICAL REVIEW B, 1993, 47 (01) :497-500
[7]  
BERG BA, 1992, PHYS REV LETT, V86, P9
[8]   CHARMM - A PROGRAM FOR MACROMOLECULAR ENERGY, MINIMIZATION, AND DYNAMICS CALCULATIONS [J].
BROOKS, BR ;
BRUCCOLERI, RE ;
OLAFSON, BD ;
STATES, DJ ;
SWAMINATHAN, S ;
KARPLUS, M .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1983, 4 (02) :187-217
[9]   THE VAN HEMMEN SPIN-GLASS REVISITED [J].
CELIK, T ;
HANSMANN, UHE ;
KATOOT, M .
JOURNAL OF STATISTICAL PHYSICS, 1993, 73 (3-4) :775-788
[10]  
FERRENBERG AM, 1989, PHYS REV LETT, V63, P1658, DOI 10.1103/PhysRevLett.63.1658.2