Interaction of Glycine with Common Atmospheric Nucleation Precursors

被引:57
作者
Elm, Jonas [1 ]
Fard, Mehrnoush [1 ]
Bilde, Merete [2 ]
Mikkelsen, Kurt V. [1 ]
机构
[1] Univ Copenhagen, HC Orsted Inst, Dept Chem, DK-2100 Copenhagen, Denmark
[2] Aarhus Univ, Dept Chem, DK-8000 Aarhus C, Denmark
关键词
DENSITY-FUNCTIONAL THEORY; GAS-PHASE HYDRATION; SULFURIC-ACID; MOLECULAR CLUSTERS; REACTION-KINETICS; ORGANIC NITROGEN; WATER-MOLECULES; FOG WATERS; AB-INITIO; AMMONIA;
D O I
10.1021/jp408962c
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The interaction between the simplest amino acid glycine in three different protonation states and common atmospheric nucleation precursors (H2O, NH3, and H2SO4) has been investigated using computational methods. Each nucleation step has been thoroughly sampled, and statistical Gibbs free energies of formation have been calculated using M06-2X/6-311++G(3df,3pd). From the stepwise Delta G values, the stabilities of the molecular clusters have been evaluated. Glycine in all three protonation states is found to have a favorable interaction with sulfuric acid with a higher cluster stabilizing effect than ammonia. The deprotonated glycine molecule is found to yield the highest stabilizing effect on the sulfuric acid clusters through the interaction of both the amino and carboxylic moieties, while the protonated glycine molecule is found to have a high stabilizing effect on the addition of water and ammonia. Furthermore, we find that a single sulfuric acid molecule is capable of stabilizing the glycine zwitterion. Sulfuric acid is found to be able to catalyze the spontaneous formation of the zwitterion and subsequently stabilize the formed ion. The formation of the glycine zwitterion occurs with a low Gibbs free energy barrier of 2.10 kcal/mol, indicating that this formation could occur rapidly in the atmosphere.
引用
收藏
页码:12990 / 12997
页数:8
相关论文
共 64 条
[1]  
ADLER TB, 2009, J CHEM PHYS, V130
[2]   A simple and efficient CCSD(T)-F12 approximation [J].
Adler, Thomas B. ;
Knizia, Gerald ;
Werner, Hans-Joachim .
JOURNAL OF CHEMICAL PHYSICS, 2007, 127 (22)
[3]   Solvent effects on NMR isotropic shielding constants.: A comparison between explicit polarizable discrete and continuum approaches [J].
Aidas, Kestutis ;
Mogelhoj, Andreas ;
Kjaer, Hanna ;
Nielsen, Christian B. ;
Mikkelsen, Kurt V. ;
Ruud, Kenneth ;
Christiansen, Ove ;
Kongsted, Jacob .
JOURNAL OF PHYSICAL CHEMISTRY A, 2007, 111 (20) :4199-4210
[4]   Structures and reaction rates of the gaseous oxidation of SO2 by an O3-(H2O)0-5 cluster - a density functional theory investigation [J].
Bork, N. ;
Kurten, T. ;
Enghoff, M. B. ;
Pedersen, J. O. P. ;
Mikkelsen, K. V. ;
Svensmark, H. .
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2012, 12 (08) :3639-3652
[5]   Ab initio studies of O2- (H2O)n and O3- (H2O)n anionic molecular clusters, n≤12 [J].
Bork, N. ;
Kurten, T. ;
Enghoff, M. B. ;
Pedersen, J. O. P. ;
Mikkelsen, K. V. ;
Svensmark, H. .
ATMOSPHERIC CHEMISTRY AND PHYSICS, 2011, 11 (14) :7133-7142
[6]   Organic nitrogen in Hawaiian rain and aerosol [J].
Cornell, S ;
Mace, K ;
Coeppicus, S ;
Duce, R ;
Huebert, B ;
Jickells, T ;
Zhuang, LZ .
JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES, 2001, 106 (D8) :7973-7983
[7]   Assessment of binding energies of atmospherically relevant clusters [J].
Elm, Jonas ;
Bilde, Merete ;
Mikkelsen, Kurt V. .
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2013, 15 (39) :16442-16445
[8]   Influence of Nucleation Precursors on the Reaction Kinetics of Methanol with the OH Radical [J].
Elm, Jonas ;
Bilde, Merete ;
Mikkelsen, Kurt V. .
JOURNAL OF PHYSICAL CHEMISTRY A, 2013, 117 (30) :6695-6701
[9]   Ambient reaction kinetics of atmospheric oxygenated organics with the OH radical: a computational methodology study [J].
Elm, Jonas ;
Jorgensen, Solvejg ;
Bilde, Merete ;
Mikkelsen, Kurt V. .
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2013, 15 (24) :9636-9645
[10]   Assessment of Density Functional Theory in Predicting Structures and Free Energies of Reaction of Atmospheric Prenucleation Clusters [J].
Elm, Jonas ;
Bilde, Merete ;
Mikkelsen, Kurt V. .
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2012, 8 (06) :2071-2077