Aberrant DNA methylation of OLIG1, a novel prognostic factor in non-small cell lung cancer

被引:32
作者
Brena, Romulo M.
Morrison, Carl
Liyanarachchi, Sandya
Jarjoura, David
Davuluri, Ramana V.
Otterson, Gregory A.
Reisman, David
Glaros, Selina
Rush, Laura J.
Plass, Christoph [1 ]
机构
[1] Ohio State Univ, Dept Mol Genet, Columbus, OH 43210 USA
[2] Ohio State Univ, Dept Mol Virol Immunol & Med Genet, Div Human Canc Genet, Columbus, OH 43210 USA
[3] Ohio State Univ, Dept Pathol, Columbus, OH 43210 USA
[4] Ohio State Univ, Coll Med & Publ Hlth, Div Biostat, Columbus, OH 43210 USA
[5] Ohio State Univ, Coll Med & Publ Hlth, Div Hematol & Oncol, Dept Internal Med, Columbus, OH 43210 USA
[6] Univ Michigan, Div Hematol & Oncol, Dept Internal Med, Ann Arbor, MI 48109 USA
[7] Ohio State Univ, Dept Vet Biosci, Columbus, OH 43210 USA
[8] Ohio State Univ, Comprehens Canc Ctr, Columbus, OH 43210 USA
来源
PLOS MEDICINE | 2007年 / 4卷 / 03期
关键词
D O I
10.1371/journal.pmed.0040108
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Background Lung cancer is the leading cause of cancer-related death worldwide. Currently, tumor, node, metastasis (TNM) staging provides the most accurate prognostic parameter for patients with non-small cell lung cancer (NSCLC). However, the overall survival of patients with resectable tumors varies significantly, indicating the need for additional prognostic factors to better predict the outcome of the disease, particularly within a given TNM subset. Methods and Findings In this study, we investigated whether adenocarcinomas and squamous cell carcinomas could be differentiated based on their global aberrant DNA methylation patterns. We performed restriction landmark genomic scanning on 40 patient samples and identified 47 DNA methylation targets that together could distinguish the two lung cancer subgroups. The protein expression of one of those targets, oligodendrocyte transcription factor 1 (OLIG1), significantly correlated with survival in NSCLC patients, as shown by univariate and multivariate analyses. Furthermore, the hazard ratio for patients negative for OLIG1 protein was significantly higher than the one for those patients expressing the protein, even at low levels. Conclusions Multivariate analyses of our data confirmed that OLIG1 protein expression significantly correlates with overall survival in NSCLC patients, with a relative risk of 0.84 (95% confidence interval 0.77-0.91, p < 0.001) along with T and N stages, as indicated by a Cox proportional hazard model. Taken together, our results suggests that OLIG1 protein expression could be utilized as a novel prognostic factor, which could aid in deciding which NSCLC patients might benefit from more aggressive therapy. This is potentially of great significance, as the addition of postoperative adjuvant chemotherapy in T2N0 NSCLC patients is still controversial.
引用
收藏
页码:572 / 584
页数:13
相关论文
共 57 条
[1]   High frequency of submicroscopic hemizygous deletion is a major mechanism of loss of expression of PTEN in uveal melanoma [J].
Abdel-Rahman, MH ;
Yang, Y ;
Zhou, XP ;
Craig, EL ;
Davidorf, FH ;
Eng, C .
JOURNAL OF CLINICAL ONCOLOGY, 2006, 24 (02) :288-295
[2]   Chromosome 2q24.2 is lost in sporadic but not in BRCA1-associated ovarian carcinomas [J].
Aghmesheh, M ;
Suo, ZH ;
Friedlander, M ;
Nesland, JM ;
Kaern, J ;
Stewart, M ;
Dorum, A ;
Tucker, KM ;
Buckley, MF .
PATHOLOGY, 2006, 38 (02) :145-151
[3]   Sonic hedgehog is required during an early phase of oligodendrocyte development in mammalian brain [J].
Alberta, JA ;
Park, SK ;
Mora, J ;
Yuk, DI ;
Pawlitzky, I ;
Iannarelli, P ;
Vartanian, T ;
Stiles, CD ;
Rowitch, DH .
MOLECULAR AND CELLULAR NEUROSCIENCE, 2001, 18 (04) :434-441
[4]  
Allred DC, 1998, MODERN PATHOL, V11, P155
[5]   bHLH transcription factor Olig1 is required to repair demyelinated lesions in the CNS [J].
Arnett, HA ;
Fancy, SPJ ;
Alberta, JA ;
Zhao, C ;
Plant, SR ;
Kaing, S ;
Raine, CS ;
Rowitch, DH ;
Franklin, RJM ;
Stiles, CD .
SCIENCE, 2004, 306 (5704) :2111-2115
[6]   Chipping away at the chip bias: RNA degradation in microarray analysis [J].
Auer, H ;
Lyianarachchi, S ;
Newsom, D ;
Klisovic, MI ;
Marcucci, U ;
Kornacker, K .
NATURE GENETICS, 2003, 35 (04) :292-293
[7]  
Baylin SB, 1998, ADV CANCER RES, V72, P141
[8]   Gene-expression profiles predict survival of patients with lung adenocarcinoma [J].
Beer, DG ;
Kardia, SLR ;
Huang, CC ;
Giordano, TJ ;
Levin, AM ;
Misek, DE ;
Lin, L ;
Chen, GA ;
Gharib, TG ;
Thomas, DG ;
Lizyness, ML ;
Kuick, R ;
Hayasaka, S ;
Taylor, JMG ;
Iannettoni, MD ;
Orringer, MB ;
Hanash, S .
NATURE MEDICINE, 2002, 8 (08) :816-824
[9]   Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses [J].
Bhattacharjee, A ;
Richards, WG ;
Staunton, J ;
Li, C ;
Monti, S ;
Vasa, P ;
Ladd, C ;
Beheshti, J ;
Bueno, R ;
Gillette, M ;
Loda, M ;
Weber, G ;
Mark, EJ ;
Lander, ES ;
Wong, W ;
Johnson, BE ;
Golub, TR ;
Sugarbaker, DJ ;
Meyerson, M .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (24) :13790-13795
[10]   Accurate quantification of DNA methylation using combined bisulfite restriction analysis coupled with the Agilent 2100 Bioanalyzer platform [J].
Brena, RM ;
Auer, H ;
Kornacker, K ;
Hackanson, B ;
Raval, A ;
Byrd, JC ;
Plass, C .
NUCLEIC ACIDS RESEARCH, 2006, 34 (03)