Enhanced Viral Etiological Diagnosis of Respiratory System Infection Outbreaks by Use of a Multitarget Nucleic Acid Amplification Assay

被引:15
作者
Wong, Sallene [1 ]
Pabbaraju, Kanti [1 ]
Lee, Bonita E. [2 ,3 ]
Fox, Julie D. [1 ,4 ]
机构
[1] Prov Lab Publ Hlth Microbiol, Calgary, AB T2N 4W4, Canada
[2] Prov Lab Publ Hlth Microbiol, Edmonton, AB, Canada
[3] Univ Alberta, Dept Paediat, Edmonton, AB, Canada
[4] Univ Calgary, Dept Microbiol & Infect Dis, Calgary, AB, Canada
关键词
HUMAN METAPNEUMOVIRUS INFECTION; TERM-CARE FACILITY; REAL-TIME PCR; VIRUS-INFECTIONS; MULTIPLEX PCR; INFLUENZA-A; TRACT INFECTIONS; HIGH-THROUGHPUT; PATHOGENS; TESTS;
D O I
10.1128/JCM.01469-09
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A study was undertaken to assess the utility of the xTAG respiratory viral panel (RVP) for enhanced laboratory investigation of respiratory outbreaks. Specimens (n = 1,108) from 244 suspected respiratory virus outbreaks in 2006 and 2007 in Alberta, Canada, were included in the study. Testing by direct fluorescent antigen detection (DFA) and various in-house nucleic acid amplification tests (NATs) for common respiratory viruses provided an etiological diagnosis in 177 outbreaks (72.5%), with 524 samples testing positive (47.3%) for a respiratory virus. Two hundred samples from 51 unresolved outbreaks were further tested by RVP retrospectively. Fifty-eight samples from 30 unresolved outbreaks had a respiratory virus detected by RVP (47 picornavirus-positive, 9 coronavirus-positive, and 2 influenza virus A-positive samples). Overall, detection of a viral etiological agent was achieved in 90.8% of outbreaks using a combination of DFA, NATs, and RVP. Use of RVP enhances the laboratory investigation of respiratory virus outbreaks and facilitates appropriate patient and outbreak management.
引用
收藏
页码:3839 / 3845
页数:7
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