METHOD OF THE YEAR Quantitative analysis of peptides and proteins in biomedicine by targeted mass spectrometry

被引:366
作者
Gillette, Michael A. [1 ,2 ]
Carr, Steven A. [1 ]
机构
[1] Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USA
[2] Massachusetts Gen Hosp, Boston, MA 02114 USA
关键词
ASSAY DEVELOPMENT; BIOMARKER; QUANTIFICATION; PLASMA; DISCOVERY; VERIFICATION; PIPELINE; VALIDATION; ENRICHMENT; PLATFORMS;
D O I
10.1038/nmeth.2309
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Targeted mass spectrometry (MS) is becoming widely used in academia and in pharmaceutical and biotechnology industries for sensitive and quantitative detection of proteins, peptides and post-translational modifications. Here we describe the increasing importance of targeted MS technologies in clinical proteomics and the potential key roles these techniques will have in bridging biomedical discovery and clinical implementation.
引用
收藏
页码:28 / 34
页数:7
相关论文
共 43 条
[1]   Automated Detection of Inaccurate and Imprecise Transitions in Peptide Quantification by Multiple Reaction Monitoring Mass Spectrometry [J].
Abbatiello, Susan E. ;
Mani, D. R. ;
Keshishian, Hasmik ;
Carr, Steven A. .
CLINICAL CHEMISTRY, 2010, 56 (02) :291-305
[2]   A pipeline that integrates the discovery and verification of plasma protein biomarkers reveals candidate markers for cardiovascular disease [J].
Addona, Terri A. ;
Shi, Xu ;
Keshishian, Hasmik ;
Mani, D. R. ;
Burgess, Michael ;
Gillette, Michael A. ;
Clauser, Karl R. ;
Shen, Dongxiao ;
Lewis, Gregory D. ;
Farrell, Laurie A. ;
Fifer, Michael A. ;
Sabatine, Marc S. ;
Gerszten, Robert E. ;
Carr, Steven A. .
NATURE BIOTECHNOLOGY, 2011, 29 (07) :635-U119
[3]   Multi-site assessment of the precision and reproducibility of multiple reaction monitoring-based measurements of proteins in plasma [J].
Addona, Terri A. ;
Abbatiello, Susan E. ;
Schilling, Birgit ;
Skates, Steven J. ;
Mani, D. R. ;
Bunk, David M. ;
Spiegelman, Clifford H. ;
Zimmerman, Lisa J. ;
Ham, Amy-Joan L. ;
Keshishian, Hasmik ;
Hall, Steven C. ;
Allen, Simon ;
Blackman, Ronald K. ;
Borchers, Christoph H. ;
Buck, Charles ;
Cardasis, Helene L. ;
Cusack, Michael P. ;
Dodder, Nathan G. ;
Gibson, Bradford W. ;
Held, Jason M. ;
Hiltke, Tara ;
Jackson, Angela ;
Johansen, Eric B. ;
Kinsinger, Christopher R. ;
Li, Jing ;
Mesri, Mehdi ;
Neubert, Thomas A. ;
Niles, Richard K. ;
Pulsipher, Trenton C. ;
Ransohoff, David ;
Rodriguez, Henry ;
Rudnick, Paul A. ;
Smith, Derek ;
Tabb, David L. ;
Tegeler, Tony J. ;
Variyath, Asokan M. ;
Vega-Montoto, Lorenzo J. ;
Wahlander, Asa ;
Waldemarson, Sofia ;
Wang, Mu ;
Whiteaker, Jeffrey R. ;
Zhao, Lei ;
Anderson, N. Leigh ;
Fisher, Susan J. ;
Liebler, Daniel C. ;
Paulovich, Amanda G. ;
Regnier, Fred E. ;
Tempst, Paul ;
Carr, Steven A. .
NATURE BIOTECHNOLOGY, 2009, 27 (07) :633-U85
[4]   The Clinical Plasma Proteome: A Survey of Clinical Assays for Proteins in Plasma and Serum [J].
Anderson, N. Leigh .
CLINICAL CHEMISTRY, 2010, 56 (02) :177-185
[5]   Mass spectrometric quantitation of peptides and proteins using stable isotope standards and capture by anti-peptide antibodies (SISCAPA) [J].
Anderson, NL ;
Anderson, NG ;
Haines, LR ;
Hardie, DB ;
Olafson, RW ;
Pearson, TW .
JOURNAL OF PROTEOME RESEARCH, 2004, 3 (02) :235-244
[6]  
Barr JR, 1996, CLIN CHEM, V42, P1676
[7]   Quantification of NTproBNP in rat serum using immunciprecipitation and LC/MS/MS: a biomarker of drug-induced cardiac hypertrophy [J].
Berna, Michael ;
Ott, Lee ;
Engle, Steve ;
Watson, David ;
Solter, Philip ;
Ackermann, Bradley .
ANALYTICAL CHEMISTRY, 2008, 80 (03) :561-566
[8]  
Brody EN, 2010, EXPERT REV MOL DIAGN, V10, P1013, DOI [10.1586/erm.10.89, 10.1586/ERM.10.89]
[9]   Isotope dilution strategies for absolute quantitative proteomics [J].
Brun, Virginie ;
Masselon, Christophe ;
Garin, Jerome ;
Dupuis, Alain .
JOURNAL OF PROTEOMICS, 2009, 72 (05) :740-749
[10]   MRM-based multiplexed quantitation of 67 putative cardiovascular disease biomarkers in human plasma [J].
Domanski, Dominik ;
Percy, Andrew J. ;
Yang, Juncong ;
Chambers, Andrew G. ;
Hill, John S. ;
Freue, Gabriela V. Cohen ;
Borchers, Christoph H. .
PROTEOMICS, 2012, 12 (08) :1222-1243