Novel methods improve prediction of species' distributions from occurrence data

被引:6787
作者
Elith, J [1 ]
Graham, CH
Anderson, RP
Dudík, M
Ferrier, S
Guisan, A
Hijmans, RJ
Huettmann, F
Leathwick, JR
Lehmann, A
Li, J
Lohmann, LG
Loiselle, BA
Manion, G
Moritz, C
Nakamura, M
Nakazawa, Y
Overton, JM
Peterson, AT
Phillips, SJ
Richardson, K
Scachetti-Pereira, R
Schapire, RE
Soberón, J
Williams, S
Wisz, MS
Zimmermann, NE
机构
[1] Univ Melbourne, Sch Bot, Parkville, Vic 3010, Australia
[2] SUNY Stony Brook, Dept Ecol & Evolut, Stony Brook, NY 11794 USA
[3] CUNY City Coll, New York, NY 10031 USA
[4] Princeton Univ, Princeton, NJ 08544 USA
[5] Dept Environm & Conservat, Armidale, NSW, Australia
[6] Univ Lausanne, CH-1015 Lausanne, Switzerland
[7] Univ Calif Berkeley, Berkeley, CA 94720 USA
[8] Univ Alaska Fairbanks, Fairbanks, AK USA
[9] NIWA, Hamilton, New Zealand
[10] Swiss Ctr Faunal Cartog, Neuchatel, Switzerland
[11] CSIRO Atherton, Atherton, Qld, Australia
[12] Univ Sao Paulo, BR-05508 Sao Paulo, Brazil
[13] Univ Missouri, St Louis, MO 63121 USA
[14] CIMAT, Mexico City, DF, Mexico
[15] Univ Kansas, Lawrence, KS 66045 USA
[16] Landcare Res, Hamilton, New Zealand
[17] AT&T Labs Res, Florham Pk, NJ USA
[18] McGill Univ, Montreal, PQ H3A 2T5, Canada
[19] James Cook Univ N Queensland, Townsville, Qld 4811, Australia
[20] Natl Environm Res Inst, Roskilde, Denmark
[21] Swiss Fed Res Inst WSL, Birmensdorf, Switzerland
关键词
D O I
10.1111/j.2006.0906-7590.04596.x
中图分类号
X176 [生物多样性保护];
学科分类号
090705 ;
摘要
Prediction of species' distributions is central to diverse applications in ecology, evolution and conservation science. There is increasing electronic access to vast sets of occurrence records in museums and herbaria, yet little effective guidance on how best to use this information in the context of numerous approaches for modelling distributions. To meet this need, we compared 16 modelling methods over 226 species from 6 regions of the world, creating the most comprehensive set of model comparisons to date. We used presence-only data to fit models, and independent presence-absence data to evaluate the predictions. Along with well-established modelling methods such as generalised additive models and GARP and BIOCLIM, we explored methods that either have been developed recently or have rarely been applied to modelling species' distributions. These include machine-learning methods and community models, both of which have features that may make them particularly well suited to noisy or sparse information, as is typical of species' occurrence data. Presence-only data were effective for modelling species' distributions for many species and regions. The novel methods consistently outperformed more established methods. The results of our analysis are promising for the use of data from museums and herbaria, especially as methods suited to the noise inherent in such data improve.
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页码:129 / 151
页数:23
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