Mayday - a microarray data analysis workbench

被引:35
作者
Dietzsch, J [1 ]
Gehlenborg, N [1 ]
Nieselt, K [1 ]
机构
[1] Univ Tubingen, Ctr Bioinformat Tubingen, Dept Informat & Cognit Sci, D-72076 Tubingen, Germany
关键词
D O I
10.1093/bioinformatics/btl070
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Mayday is a workbench for visualization, analysis and storage of microarray data. It features a graphical user interface and supports the development and integration of existing and new analysis methods. Besides the infrastructural core functionality, Mayday offers a variety of plug-ins, such as various interactive viewers, a connection to the R statistical environment, a connection to SQL-based databases and different data mining methods, including WEKA-library based methods for classification and various clustering methods. In addition, so-called meta information objects are provided for annotation of the microarray data allowing integration of data from different sources, which is a feature that, for instance, is employed in the enhanced heatmap visualization.
引用
收藏
页码:1010 / 1012
页数:3
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