Multibaric-multithermal ensemble molecular dynamics simulations

被引:42
作者
Okumura, H [1 ]
Okamoto, Y
机构
[1] Inst Mol Sci, Dept Theoret Studies, Okazaki, Aichi 4448585, Japan
[2] Grad Univ Adv Studies, Dept Struct Mol Sci, Okazaki, Aichi 4448585, Japan
[3] Nagoya Univ, Grad Sch Sci, Dept Phys, Nagoya, Aichi 4648602, Japan
关键词
multibaric-multithermal ensemble; isobaric-isothermal ensemble; generalized-ensemble algorithm; symplectic algorithm; molecular dynamics simulation; Lennard-Jones potential;
D O I
10.1002/jcc.20351
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
We present new generalized-ensemble molecular dynamics simulation algorithms, which we refer to as the multi baric-multithermal molecular dynamics. We describe three algorithms based on (1) the Nose thermostat and the Andersen barostat, (2) the Nose-Poincare thermostat and the Andersen barostat, and (3) the Gaussian thermostat and the Andersen barostat. The multibaric-multithermal simulations perform random walks widely both in the potential-energy space and in the volume space. Therefore, one can calculate isobaric-isothermal ensemble averages in wide ranges of temperature and pressure from only one simulation run. We test the effectiveness of the multibaric-multithermal algorithm by applying it to a Lennard-Jones 12-6 potential system. (c) 2005 Wiley Periodicals, Inc.
引用
收藏
页码:379 / 395
页数:17
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