A retrospective assessment of the accuracy of the paternity inference program CERVUS

被引：266

作者：

Slate, J ^{[1
]}

Marshall, T ^{[1
]}

Pemberton, J ^{[1
]}

机构：

[1] Univ Edinburgh, Inst Cell Anim & Populat Biol, Edinburgh EH9 3JT, Midlothian, Scotland

来源：

MOLECULAR ECOLOGY | 2000年 / 9卷 / 06期

关键词：

error rate; exclusion; likelihood; LOD score; microsatellite; red deer;

D O I：

10.1046/j.1365-294x.2000.00930.x

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

cervus is a Windows-based software package written to infer paternity in natural populations. It offers advantages over exclusionary-based methods of paternity inference in that multiple nonexcluded males can be statistically distinguished, laboratory typing error is considered and statistical confidence is determined for assigned paternities through simulation. In this study we use a panel of 84 microsatellite markers to retrospectively determine the accuracy of statistical confidence when cervus was used to infer paternity in a population of red deer (Cervus elaphus). The actual confidence of cervus-assigned paternities was not significantly different from that predicted by simulation.

引用

页码：801 / 808

页数：8

共 26 条

[1]

BISHOP MD, 1994, GENETICS, V136, P619

[2]

BUCHANAN FC, 1994, ANIM GENET, V25, P60, DOI 10.1111/j.1365-2052.1994.tb00069.x

[3] Male reproductive success in a promiscuous mammal: behavioural estimates compared with genetic paternity [J].

Coltman, DW ;

Bancroft, DR ;

Robertson, A ;

Smith, JA ;

Clutton-Brock, TH ;

Pemberton, JM .

MOLECULAR ECOLOGY, 1999, 8 (07) :1199-1209

[4] OVINE DINUCLEOTIDE REPEAT POLYMORPHISM AT THE MAF18 LOCUS [J].

CRAWFORD, AM ;

BUCHANAN, FC ;

SWARBRICK, PA .

ANIMAL GENETICS, 1990, 21 (04) :433-434

[5] THE BOVINE GENOME MAP [J].

FRIES, R ;

EGGEN, A ;

WOMACK, JE .

MAMMALIAN GENOME, 1993, 4 (08) :405-428

[6] Intracommunity relationships, dispersal pattern and paternity success in a wild living community of Bonobos (Pan paniscus) determined from DNA analysis of faecal samples [J].

Gerloff, U ;

Hartung, B ;

Fruth, B ;

Hohmann, G ;

Tautz, D .

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 1999, 266 (1424) :1189-1195

[7]

HULME DJ, 1994, ANIM GENET, V25, P434, DOI 10.1111/j.1365-2052.1994.tb00543.x

[8]

KEMP SJ, 1995, ANIM GENET, V26, P299, DOI 10.1111/j.1365-2052.1995.tb02663.x

[9] BOVINE DINUCLEOTIDE REPEAT POLYMORPHISM-RM004 [J].

KOSSAREK, LM ;

GROSSE, WM ;

DIETZ, AB ;

WOMACK, JE ;

MCGRAW, RA .

JOURNAL OF ANIMAL SCIENCE, 1993, 71 (11) :3175-3175

[10] BOVINE DINUCLEOTIDE REPEAT POLYMORPHISM RM095 [J].

KOSSAREK, LM ;

GROSSE, WM ;

FINLAY, O ;

DIETZ, AB ;

WOMACK, JE ;

MCGRAW, RA .

JOURNAL OF ANIMAL SCIENCE, 1994, 72 (01) :254-254

← 1 2 3 →