An extended x-ray absorption fine structure study by employing molecular dynamics simulations: Bromide ion in methanolic solution

被引:50
作者
DAngelo, P [1 ]
DiNola, A [1 ]
Mangoni, M [1 ]
Pavel, NV [1 ]
机构
[1] UNIV ROMA LA SAPIENZA, DIPARTIMENTO CHIM, I-00185 ROME, ITALY
关键词
D O I
10.1063/1.471711
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
X-ray absorption spectroscopy is widely employed in the structural analysis of disordered systems. In the standard extended x-ray absorption fine structure (EXAFS) analysis the coordination of the photoabsorber is usually defined by means of Gaussian shells. It is known that this procedure can lead to significant errors in the determination of the coordination parameters for systems which present anharmonic thermal vibrations or interatomic asymmetric pair distribution functions. An efficient method has been recently employed in the study of the hydration shells of bromide and rubidium ions and brominated hydrocarbon molecules in diluted aqueous solutions. According to this method, pair distribution functions [g(r)] obtained from molecular dynamics simulations can be used as relevant models in the calculation of the EXAFS signals. Moreover, asymmetric shells modeled on the g(r) first peaks, have been employed in the EXAFS analysis and the parameters defining the asymmetric peaks have been optimized during the minimization procedure. In the present paper this new procedure has been used to investigate the coordination of Br- in methanol. The analysis of this system is particularly interesting due to the presence of three well separated coordination shells. We show that the inclusion of the hydrogen signal is essential to perform a reliable analysis. A comparison of the analysis with asymmetric and Gaussian shells shows how the accuracy of the EXAFS data analysis is improved by using asymmetric shells. (C) 1996 American Institute of Physics.
引用
收藏
页码:1779 / 1790
页数:12
相关论文
共 59 条
  • [1] Allen M.P., 1987, Computer Simulation of Liquids, DOI DOI 10.1093/OSO/9780198803195.001.0001
  • [2] STRUCTURAL CHARACTERIZATION OF DIATOMIC FLUIDS BY DIFFRACTION STUDIES
    ANDREANI, C
    DORE, JC
    RICCI, FP
    [J]. REPORTS ON PROGRESS IN PHYSICS, 1991, 54 (05) : 731 - 788
  • [3] A MOLECULAR-DYNAMICS STUDY OF THE C-TERMINAL FRAGMENT OF THE L7/L12 RIBOSOMAL-PROTEIN - SECONDARY STRUCTURE MOTION IN A 150 PICOSECOND TRAJECTORY
    AQVIST, J
    VANGUNSTEREN, WF
    LEIJONMARCK, M
    TAPIA, O
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1985, 183 (03) : 461 - 477
  • [4] MOLECULAR-DYNAMICS WITH COUPLING TO AN EXTERNAL BATH
    BERENDSEN, HJC
    POSTMA, JPM
    VANGUNSTEREN, WF
    DINOLA, A
    HAAK, JR
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1984, 81 (08) : 3684 - 3690
  • [5] Bevington P.R., 1969, Data Reduction and Error Analysis for the Physical Sciences, V1st
  • [6] EXTENDED-X-RAY-ABSORPTION-FINE-STRUCTURE INVESTIGATION OF MOBILE-ION DENSITY IN SUPERIONIC AGI, CUI, CUBR, AND CUCL
    BOYCE, JB
    HAYES, TM
    MIKKELSEN, JC
    [J]. PHYSICAL REVIEW B, 1981, 23 (06): : 2876 - 2896
  • [7] APPLICATION OF THE RATIO METHOD OF EXAFS ANALYSIS TO DISORDERED-SYSTEMS
    BUNKER, G
    [J]. NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH, 1983, 207 (03): : 437 - 444
  • [8] MULTIPLE-SCATTERING X-RAY-ABSORPTION ANALYSIS OF SIMPLE BROMINATED HYDROCARBON MOLECULES
    BURATTINI, E
    DANGELO, P
    DICICCO, A
    FILIPPONI, A
    PAVEL, NV
    [J]. JOURNAL OF PHYSICAL CHEMISTRY, 1993, 97 (21) : 5486 - 5494
  • [9] ABINITIO CALCULATION OF EXTENDED X-RAY-ABSORPTION FINE-STRUCTURE IN BR-2
    CHOU, SH
    REHR, JJ
    STERN, EA
    DAVIDSON, ER
    [J]. PHYSICAL REVIEW B, 1987, 35 (06): : 2604 - 2614
  • [10] A NEW PROCEDURE FOR PARTICLE-SIZE DETERMINATION BY EXAFS BASED ON MOLECULAR-DYNAMICS SIMULATIONS
    CLAUSEN, BS
    GRABAEK, L
    TOPSOE, H
    HANSEN, LB
    STOLTZE, P
    NORSKOV, JK
    NIELSEN, OH
    [J]. JOURNAL OF CATALYSIS, 1993, 141 (02) : 368 - 379