The role of mutational robustness in RNA virus evolution

被引:273
作者
Lauring, Adam S. [1 ,2 ]
Frydman, Judith [3 ]
Andino, Raul [4 ]
机构
[1] Univ Michigan, Sch Med, Dept Internal Med, Div Infect Dis, Ann Arbor, MI 48109 USA
[2] Univ Michigan, Sch Med, Dept Microbiol & Immunol, Ann Arbor, MI 48109 USA
[3] Stanford Univ, Dept Biol, Stanford, CA 94305 USA
[4] Univ Calif San Francisco, Dept Microbiol & Immunol, San Francisco, CA 94143 USA
关键词
SILICO PREDICTED ROBUSTNESS; ERROR CATASTROPHE; LETHAL MUTAGENESIS; SECONDARY STRUCTURES; CODON USAGE; VIRAL-RNA; FITNESS; PROTEIN; POLIOVIRUS; NUCLEOTIDE;
D O I
10.1038/nrmicro3003
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
RNA viruses face dynamic environments and are masters at adaptation. During their short 'lifespans', they must surmount multiple physical, anatomical and immunological challenges. Central to their adaptative capacity is the enormous genetic diversity that characterizes RNA virus populations. Although genetic diversity increases the rate of adaptive evolution, Low replication fidelity can present a risk because excess mutations can lead to population extinction. In this Review, we discuss the strategies used by RNA viruses to deal with the increased mutational load and consider how this mutational robustness might influence viral evolution and pathogenesis.
引用
收藏
页码:327 / 336
页数:10
相关论文
共 92 条
[1]   Beet yellows closterovirus HSP70-like protein mediates the cell-to-cell movement of a potexvirus transport-deficient mutant and a hordeivirus-based chimeric virus [J].
Agranovsky, AA ;
Folimonov, AS ;
Folimonova, SY ;
Morozov, SY ;
Schiemann, J ;
Lesemann, D ;
Atabekov, JG .
JOURNAL OF GENERAL VIROLOGY, 1998, 79 :889-895
[2]  
ALFANO C, 1989, J BIOL CHEM, V264, P10709
[3]   Viral error catastrophe by mutagenic nucleosides [J].
Anderson, JP ;
Daifuku, R ;
Loeb, LA .
ANNUAL REVIEW OF MICROBIOLOGY, 2004, 58 :183-205
[4]   Remote site control of an active site fidelity checkpoint in a viral RNA-dependent RNA polymerase [J].
Arnold, JJ ;
Vignuzzi, M ;
Stone, JK ;
Andino, R ;
Cameron, CE .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (27) :25706-25716
[5]   The error threshold [J].
Biebricher, CK ;
Eigen, M .
VIRUS RESEARCH, 2005, 107 (02) :117-127
[6]   Protein stability promotes evolvability [J].
Bloom, JD ;
Labthavikul, ST ;
Otey, CR ;
Arnold, FH .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (15) :5869-5874
[7]   Theory of lethal mutagenesis for viruses [J].
Bull, J. J. ;
Sanjuan, R. ;
Wilke, C. O. .
JOURNAL OF VIROLOGY, 2007, 81 (06) :2930-2939
[8]   Slow Fitness Recovery in a Codon-Modified Viral Genome [J].
Bull, J. J. ;
Molineux, I. J. ;
Wilke, C. O. .
MOLECULAR BIOLOGY AND EVOLUTION, 2012, 29 (10) :2997-3004
[9]   Genetic Inactivation of Poliovirus Infectivity by Increasing the Frequencies of CpG and UpA Dinucleotides within and across Synonymous Capsid Region Codons [J].
Burns, Cara C. ;
Campagnoli, Ray ;
Shaw, Jing ;
Vincent, Annelet ;
Jorba, Jaume ;
Kew, Olen .
JOURNAL OF VIROLOGY, 2009, 83 (19) :9957-9969
[10]   Modulation of poliovirus replicative fitness in HeLa cells by deoptimization of synonymous codon usage in the capsid region [J].
Burns, CC ;
Shaw, J ;
Campagnoli, R ;
Jorba, J ;
Vincent, A ;
Quay, J ;
Kew, O .
JOURNAL OF VIROLOGY, 2006, 80 (07) :3259-3272