Bacterial Diversity of Freshwater Alpine Lake Puma Yumco on the Tibetan Plateau

被引:71
作者
Liu, Yongqin [1 ]
Yao, Tandong [1 ]
Zhu, Liping [1 ]
Jiao, Nianzhi [2 ]
Liu, Xiaobo [2 ]
Zeng, Yonghui [2 ]
Jiang, Hongchen [3 ,4 ]
机构
[1] Chinese Acad Sci, Inst Tibetan Plateau Res, Beijing 100085, Peoples R China
[2] Xiamen Univ, State Key Lab Marine Environm Sci, Xiamen 361005, Peoples R China
[3] China Univ Geosci, Sch Earth Sci, Beijing 100083, Peoples R China
[4] China Univ Geosci, Geomicrobiol Lab, Beijing 100083, Peoples R China
基金
中国国家自然科学基金;
关键词
bacterial diversity; Lake Puma Yumco; Tibetan Plateau; RIBOSOMAL-RNA GENE; HIGH-MOUNTAIN LAKE; 16S RDNA; COMMUNITY COMPOSITION; DATABASE PROJECT; ORGANIC-MATTER; RDP-II; SEQUENCES; DYNAMICS; CHINA;
D O I
10.1080/01490450802660201
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Bacterial community in the water of Lake Puma Yumco, a freshwater alpine lake on the Tibetan Plateau was studied for the first time using an integrated approach including water chemistry and culture-dependent and -independent methods. Microbial abundance in the lake water was from 1.59 105 to 3.37 105 cells mL- 1, and bacteria were evenly distributed in the lake due to its uniform water physical-chemistry. Obtained isolates were affiliated with -, - and -Proteobacteria, Actinobacteria and Bacteroidetes, among which -Proteobacteria isolates were dominant. Retrieved bacterial 16S rRNA gene clones fell into -, - and -Proteobacteria, Actinobacteria, Bacteroidetes, Cyanobacteria, Planctomycetes, Verrucomicrobia and Chloroflexi. Bacterial diversity in Lake Puma Yumco was higher than that in other Tibetan lakes at levels of both phyla and clusters. A half of total clones in Lake Puma Yumco were members of the widespread typical freshwater bacterial clusters. The low temperature of Lake Puma Yumco also made it possess unique freshwater bacteria members.
引用
收藏
页码:131 / 145
页数:15
相关论文
共 44 条
  • [1] PCR-induced sequence artifacts and bias: Insights from comparison of two 16S rRNA clone libraries constructed from the same sample
    Acinas, SG
    Sarma-Rupavtarm, R
    Klepac-Ceraj, V
    Polz, MF
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2005, 71 (12) : 8966 - 8969
  • [2] Diversity and seasonal dynamics of Actinobacteria populations in four lakes in northeastern Germany
    Allgaier, Martin
    Grossart, Hans-Peter
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2006, 72 (05) : 3489 - 3497
  • [3] Viral lysis, flagellate grazing potential, and bacterial production in Lake Pavin
    Bettarel, Y
    Amblard, C
    Sime-Ngando, T
    Carrias, JF
    Sargos, D
    Garabétian, F
    Lavandier, P
    [J]. MICROBIAL ECOLOGY, 2003, 45 (02) : 119 - 127
  • [4] BROSIUS J, 1978, P NATL ACAD SCI USA, V75, P4801, DOI 10.1073/pnas.75.10.4801
  • [5] Temporal plankton dynamics in an oligotrophic maritime Antarctic lake
    Butler, HG
    Edworthy, MG
    Ellis-Evans, JC
    [J]. FRESHWATER BIOLOGY, 2000, 43 (02) : 215 - 230
  • [6] Callieri C., 1999, J LIMNOL, V58, P136, DOI DOI 10.4081/JLIMN01.1999.136)
  • [7] The interaction of phytoplankton and bacteria in a high mountain lake:: Importance of the spectral composition of solar radiation
    Carrillo, P
    Medina-Sánchez, JM
    Villar-Argaiz, M
    [J]. LIMNOLOGY AND OCEANOGRAPHY, 2002, 47 (05) : 1294 - 1306
  • [8] Cold-active chemoorganotrophic bacteria from permanently ice-covered Lake Hoare, McMurdo Dry Valleys, Antarctica
    Clocksin, Kate M.
    Jung, Deborah O.
    Madigan, Michael T.
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2007, 73 (09) : 3077 - 3083
  • [9] The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis
    Cole, JR
    Chai, B
    Farris, RJ
    Wang, Q
    Kulam, SA
    McGarrell, DM
    Garrity, GM
    Tiedje, JM
    [J]. NUCLEIC ACIDS RESEARCH, 2005, 33 : D294 - D296
  • [10] Bacterioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source
    Crump, BC
    Kling, GW
    Bahr, M
    Hobbie, JE
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2003, 69 (04) : 2253 - 2268