A family of symplectic integrators: Stability, accuracy, and molecular dynamics applications

被引:77
作者
Skeel, RD
Zhang, GH
Schlick, T
机构
[1] UNIV ILLINOIS, BECKMAN INST, URBANA, IL 61801 USA
[2] NYU, DEPT CHEM, NEW YORK, NY 10012 USA
[3] NYU, COURANT INST MATH SCI, NEW YORK, NY 10012 USA
关键词
leapfrog; Stormer; Verlet; implicit midpoint; trapezoid; Cowell; Numerov; symplectic integrator; molecular dynamics; method of modified equations;
D O I
10.1137/S1064827595282350
中图分类号
O29 [应用数学];
学科分类号
070104 ;
摘要
The following integration methods for special second-order ordinary differential equations are studied: leapfrog, implicit midpoint, trapezoid, Stormer-Verlet, and Cowell-Numerov. We show that all are members, or equivalent to members, of a one-parameter family of schemes. Some methods have more than one common form, and we discuss a systematic enumeration of these forms. We also present a stability and accuracy analysis based on the idea of ''modified equations'' and a proof of symplecticness. It follows that Cowell-Numerov and ''LIM2'' (a method proposed by Zhang and Schlick) are symplectic. A different interpretation of the values used by these integrators leads to higher accuracy and better energy conservation. Hence, we suggest that the straightforward analysis of energy conservation is misleading.
引用
收藏
页码:203 / 222
页数:20
相关论文
共 35 条
  • [1] Allen M.P., 1987, Computer Simulation of Liquids, DOI DOI 10.1093/OSO/9780198803195.001.0001
  • [2] Arnold V.I., 1989, MATH METHODS CLASSIC, Vsecond
  • [3] DANGERS OF MULTIPLE TIME-STEP METHODS
    BIESIADECKI, JJ
    SKEEL, RD
    [J]. JOURNAL OF COMPUTATIONAL PHYSICS, 1993, 109 (02) : 318 - 328
  • [4] Butcher J C., 1969, Conference on the numerical solution of differential equations, P133
  • [5] COWELL PH, 1910, INVESTIGATION MOTION, P1
  • [6] DAHLQUIST G, 1975, ERROR ANAL CLASS MET, P60
  • [7] DELAMBRE J, 1790, MEM ACAD TURIN, V5, P143
  • [8] SYMPLECTIC INTEGRATORS FOR LONG-TERM INTEGRATIONS IN CELESTIAL MECHANICS
    Gladman, Brett
    Duncan, Martin
    Candy, Jeff
    [J]. CELESTIAL MECHANICS & DYNAMICAL ASTRONOMY, 1991, 52 (03) : 221 - 240
  • [9] GONZALEZ O, IN PRESS COMPUT METH
  • [10] GENERALIZED VERLET ALGORITHM FOR EFFICIENT MOLECULAR DYNAMICS SIMULATIONS WITH LONG-RANGE INTERACTIONS
    Grubmueller, H.
    Heller, H.
    Windemuth, A.
    Schulten, K.
    [J]. MOLECULAR SIMULATION, 1991, 6 (1-3) : 121 - 142