Towards multiscale modeling of influenza infection

被引:53
作者
Murillo, Lisa N. [1 ]
Murillo, Michael S. [1 ]
Perelson, Alan S. [1 ]
机构
[1] Los Alamos Natl Lab, Los Alamos, NM 87545 USA
关键词
Influenza A virus model; Epidemiological; Viral kinetics; Networks; Metapopulation; A VIRUS-INFECTION; BRONCHIAL MUCUS GLYCOPROTEINS; ALVEOLAR EPITHELIAL-CELLS; ADAPTIVE IMMUNE-RESPONSE; PANDEMIC INFLUENZA; WITHIN-HOST; MATHEMATICAL-MODEL; VIRAL DYNAMICS; DC-SIGN; EVOLUTIONARY DYNAMICS;
D O I
10.1016/j.jtbi.2013.03.024
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Aided by recent advances in computational power, algorithms, and higher fidelity data, increasingly detailed theoretical models of infection with influenza A virus are being developed. We review single scale models as they describe influenza infection from intracellular to global scales, and, in particular, we consider those models that capture details specific to influenza and can be used to link different scales. We discuss the few multiscale models of influenza infection that have been developed in this emerging field. In addition to discussing modeling approaches, we also survey biological data on influenza infection and transmission that is relevant for constructing influenza infection models. We envision that, in the future, multiscale models that capitalize on technical advances in experimental biology and high performance computing could be used to describe the large spatial scale epidemiology of influenza infection, evolution of the virus, and transmission between hosts more accurately. Published by Elsevier Ltd.
引用
收藏
页码:267 / 290
页数:24
相关论文
共 282 条
[1]   Comparing large-scale computational approaches to epidemic modeling: Agent-based versus structured metapopulation models [J].
Ajelli, Marco ;
Goncalves, Bruno ;
Balcan, Duygu ;
Colizza, Vittoria ;
Hu, Hao ;
Ramasco, Jose J. ;
Merler, Stefano ;
Vespignani, Alessandro .
BMC INFECTIOUS DISEASES, 2010, 10
[2]  
ALFORD RH, 1966, P SOC EXP BIOL MED, V122, P800, DOI 10.3181/00379727-122-31255
[3]   Modeling the Dynamics of Viral Evolution Considering Competition Within Individual Hosts and at Population Level: The Effects of Treatment [J].
Amaku, Marcos ;
Burattini, Marcelo Nascimento ;
Coutinho, Francisco Antonio Bezerra ;
Massad, Eduardo .
BULLETIN OF MATHEMATICAL BIOLOGY, 2010, 72 (05) :1294-1314
[4]  
Anderson R. M., 2008, INFECT DIS HUMANS DY
[5]   The dynamics of cocirculating influenza strains conferring partial cross-immunity [J].
Andreasen, V ;
Lin, J ;
Levin, SA .
JOURNAL OF MATHEMATICAL BIOLOGY, 1997, 35 (07) :825-842
[6]   Dynamics of virus spread in the presence of fluid flow [J].
Anekal, Samartha G. ;
Zhu, Ying ;
Graham, Michael D. ;
Yin, John .
INTEGRATIVE BIOLOGY, 2009, 1 (11-12) :664-671
[7]  
[Anonymous], 2009, SOCIAL NETWORK ANAL
[8]  
[Anonymous], 1999, Epidemic modeling, an introduction
[9]  
[Anonymous], 1997, COMPLEXITY COOPERATI
[10]   A model of an age-structured population in a multipatch environment [J].
Arino, O ;
Sanchez, E ;
de la Parra, RB .
MATHEMATICAL AND COMPUTER MODELLING, 1998, 27 (04) :137-150