Halogen bonding and other σ-hole interactions: a perspective

被引:1413
作者
Politzer, Peter [1 ,2 ]
Murray, Jane S. [1 ,2 ]
Clark, Timothy [3 ,4 ,5 ]
机构
[1] Univ New Orleans, Dept Chem, New Orleans, LA 70148 USA
[2] CleveTheoComp, Cleveland, OH 44113 USA
[3] Univ Erlangen Nurnberg, Comp Chem Ctr, D-91052 Erlangen, Germany
[4] Univ Erlangen Nurnberg, Interdisciplinary Ctr Mol Mat, D-91052 Erlangen, Germany
[5] Univ Portsmouth, Ctr Mol Design, Portsmouth PO1 2DY, Hants, England
关键词
SURFACE ELECTROSTATIC POTENTIALS; ENTHALPY-ENTROPY COMPENSATION; NONBONDED ATOMIC CONTACTS; HYDROGEN-BONDED DIMERS; INTERMOLECULAR INTERACTIONS; CRYSTAL-STRUCTURE; DIRECTIONAL PREFERENCES; BINDING CONSTANTS; ANISOTROPIC ATOM; DIVALENT SULFUR;
D O I
10.1039/c3cp00054k
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A sigma-hole bond is a noncovalent interaction between a covalently-bonded atom of Groups IV-VII and a negative site, e.g. a lone pair of a Lewis base or an anion. It involves a region of positive electrostatic potential, labeled a sigma-hole, on the extension of one of the covalent bonds to the atom. The sigma-hole is due to the anisotropy of the atom's charge distribution. Halogen bonding is a subset of sigma-hole interactions. Their features and properties can be fully explained in terms of electrostatics and polarization plus dispersion. The strengths of the interactions generally correlate well with the magnitudes of the positive and negative electrostatic potentials of the sigma-hole and the negative site. In certain instances, however, polarizabilities must be taken into account explicitly, as the polarization of the negative site reaches a level that can be viewed as a degree of dative sharing (coordinate covalence). In the gas phase, sigma-hole interactions with neutral bases are often thermodynamically unfavorable due to the relatively large entropy loss upon complex formation.
引用
收藏
页码:11178 / 11189
页数:12
相关论文
共 128 条
[1]   Perfluorocarbon-hydrocarbon self-assembling.: 1D infinite chain formation driven by nitrogen•••iodine interactions [J].
Amico, V ;
Meille, SV ;
Corradi, E ;
Mesina, MT ;
Resnati, G .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1998, 120 (32) :8261-8262
[2]  
[Anonymous], WILEY INTERDISCIP RE
[3]   Halogen bonds in biological molecules [J].
Auffinger, P ;
Hays, FA ;
Westhof, E ;
Ho, PS .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (48) :16789-16794
[4]   The nature of halogen ... halogen synthons: Crystallographic and theoretical studies [J].
Awwadi, Firas F. ;
Willett, Roger D. ;
Peterson, Kirk A. ;
Twamley, Brendan .
CHEMISTRY-A EUROPEAN JOURNAL, 2006, 12 (35) :8952-8960
[5]   PROPERTIES OF ATOMS IN MOLECULES - ATOMIC VOLUMES [J].
BADER, RFW ;
CARROLL, MT ;
CHEESEMAN, JR ;
CHANG, C .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1987, 109 (26) :7968-7979
[6]   STRUCTURAL CHEMISTRY OF DONOR-ACCEPTOR INTERACTIONS [J].
BENT, HA .
CHEMICAL REVIEWS, 1968, 68 (05) :587-&
[7]   LOW-TEMPERATURE INFRARED STUDY OF HYDROGEN-BONDING IN N-ALKYLACETAMIDES [J].
BERNARDH.MC ;
SANDORFY, C .
CANADIAN JOURNAL OF CHEMISTRY, 1973, 51 (21) :3640-3646
[8]   Halogen bonding in crystal structure of 1-methylpyrrol-2-yl trichloromethyl ketone [J].
Bilewicz, Elzbieta ;
Rybarczyk-Pirek, Agnieszka J. ;
Dubis, Alina T. ;
Grabowski, Slawomir J. .
JOURNAL OF MOLECULAR STRUCTURE, 2007, 829 (1-3) :208-211
[9]   Theoretical investigations on chalcogen-chalcogen interactions:: What makes these nonbonded interactions bonding? [J].
Bleiholder, C ;
Werz, DB ;
Köppel, H ;
Gleiter, R .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2006, 128 (08) :2666-2674
[10]  
BRINCK T, 1992, INT J QUANTUM CHEM, V44, P57