The UCLA multimodal connectivity database: a web-based platform for brain connectivity matrix sharing and analysis

被引:99
作者
Brown, JesseA. [1 ,2 ]
Rudie, Jeffrey D. [3 ,4 ]
Bandrowski, Anita [5 ]
Van Horn, John D. [6 ]
Bookheimer, Susan Y. [1 ,2 ]
机构
[1] Univ Calif Los Angeles, Ctr Cognit Neurosci, Los Angeles, CA 90095 USA
[2] Univ Calif Los Angeles, Dept Psychiat & Biobehav Sci, Los Angeles, CA 90095 USA
[3] Univ Calif Los Angeles, Interdept Program Neurosci, Los Angeles, CA 90095 USA
[4] Univ Calif Los Angeles, Brain Mapping Ctr, Los Angeles, CA 90095 USA
[5] Univ Calif San Diego, Ctr Res Biol Syst, San Diego, CA 92103 USA
[6] Univ Calif Los Angeles, Dept Neurol, Lab Neuroimaging, Los Angeles, CA 90095 USA
关键词
graph theory; data sharing; functional connectivity; structural connectivity; resting-state fMRI; diffusion-weighted MRI; STRUCTURAL CORTICAL NETWORKS; RESTING-STATE NETWORKS; FUNCTIONAL CONNECTIVITY; GLOBAL SIGNAL; INFORMATION FRAMEWORK; NEUROSCIENCE; ORGANIZATION; RECONFIGURATION; CLASSIFICATION; TRACTOGRAPHY;
D O I
10.3389/fninf.2012.00028
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Brain connectomics research has rapidly expanded using functional MBI (fMRI) and diffusion-weighted MRI (dwMRI). A common product of these varied analyses is a connectivity matrix (CM). A CM stores the connection strength between any two regions ("nodes") in a brain network. This format is useful for several reasons: (1) it is highly distilled, with minimal data size and complexity, (2) graph theory can be applied to characterize the network's topology, and (3) it retains sufficient information to capture individual differences such as age, gender, intelligence quotient (10), or disease state. Here we introduce the UCLA Multimodal Connectivity Database (http://umcd.humanconnectomeproject.org), an openly available website for brain network analysis and data sharing. The site is a repository for researchers to publicly share CMs derived from their data The site also allows users to select any CM shared by another user, compute graph theoretical metrics on the site, visualize a report of results, or download the raw CM. To date, users have contributed over 2000 individual CMs, spanning different imaging modalities (fMAI, dwMBI) and disorders (Alzheimer's, autism, Attention Deficit Hyperactive Disorder). To demonstrate the site's functionality, whole brain functional and structural connectivity matrices are derived from 60 subjects' (ages 26-45) resting state fMRI (rs-fMRI) and dwMRI data and uploaded to the site The site is utilized to derive graph theory global and regional measures for the rs-fMRI and dwMRI networks. Global and nodal graph theoretical measures between functional and structural networks exhibit low correspondence. This example demonstrates how this tool can enhance the comparability of brain networks from different imaging modalities and studies. The existence of this connectivity based repository should foster broader data sharing and enable larger scale meta-analyses comparing networks across imaging modality, age group, and disease state.
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页数:17
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