The cerebellum ages slowly according to the epigenetic clock

被引:140
作者
Horvath, Steve [1 ,2 ]
Mah, Vei [3 ]
Lu, Ake T. [1 ]
Woo, Jennifer S. [3 ]
Choi, Oi-Wa [4 ]
Jasinska, Anna J. [4 ]
Riancho, Jose A. [5 ]
Tung, Spencer [3 ]
Coles, Natalie S. [6 ]
Braun, Jonathan [3 ]
Vinters, Harry V. [3 ]
Coles, L. Stephen [6 ]
机构
[1] Univ Calif Los Angeles, David Geffen Sch Med, Human Genet, Los Angeles, CA 90095 USA
[2] Univ Calif Los Angeles, Sch Publ Hlth, Biostat, Los Angeles, CA 90095 USA
[3] Univ Calif Los Angeles, David Geffen Sch Med, Pathol & Lab Med, Los Angeles, CA 90095 USA
[4] Univ Calif Los Angeles, Ctr Neurobehav Genet, Los Angeles, CA 90095 USA
[5] HU Marques de Valdecilla IFIMAV Univ Cantabria, Dept Internal Med, Santander 39008, Spain
[6] Univ Calif Los Angeles, Inst Mol Biol, Dept Chem & Biochem, Los Angeles, CA 90095 USA
来源
AGING-US | 2015年 / 7卷 / 05期
关键词
tissue aging; brain; epigenetics; biomarker of aging; centenarian; DNA METHYLATION CHANGES; CEREBRAL BLOOD-FLOW; HUMAN BRAIN; ALZHEIMERS-DISEASE; GLUCOSE-METABOLISM; HUMAN TISSUES; NORMALIZATION; HELICASES; ASSOCIATION; QUANTILE;
D O I
10.18632/aging.100742
中图分类号
Q2 [细胞生物学];
学科分类号
071013 [干细胞生物学];
摘要
Studies that elucidate why some human tissues age faster than others may shed light on how we age, and ultimately suggest what interventions may be possible. Here we utilize a recent biomarker of aging (referred to as epigenetic clock) to assess the epigenetic ages of up to 30 anatomic sites from supercentenarians (subjects who reached an age of 110 or older) and younger subjects. Using three novel and three published human DNA methylation data sets, we demonstrate that the cerebellum ages more slowly than other parts of the human body. We used both transcriptional data and genetic data to elucidate molecular mechanisms which may explain this finding. The two largest superfamilies of helicases (SF1 and SF2) are significantly over-represented (p=9.2x10(-9)) among gene transcripts that are over-expressed in the cerebellum compared to other brain regions from the same subject. Furthermore, SNPs that are associated with epigenetic age acceleration in the cerebellum tend to be located near genes from helicase superfamilies SF1 and SF2 (enrichment p=5.8x10(-3)). Our genetic and transcriptional studies of epigenetic age acceleration support the hypothesis that the slow aging rate of the cerebellum is due to processes that involve RNA helicases.
引用
收藏
页码:294 / 306
页数:13
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