Limited contribution of common genetic variants to risk for liver injury due to a variety of drugs

被引:103
作者
Urban, Thomas J. [2 ]
Shen, Yufeng [8 ]
Stolz, Andrew [6 ]
Chalasani, Naga [10 ]
Fontana, Robert J. [11 ]
Rochon, James [2 ]
Ge, Dongliang [2 ]
Shianna, Kevin V. [2 ]
Daly, Ann K. [16 ]
Isabel Lucena, M. [20 ]
Nelson, Matthew R. [3 ]
Molokhia, Mariam [17 ]
Aithal, Guruprasad P. [18 ,19 ]
Floratos, Aris [8 ]
Pe'er, Itsik [9 ]
Serrano, Jose [12 ]
Bonkovsky, Herbert [4 ,5 ,21 ]
Davern, Timothy J. [7 ]
Lee, William M. [13 ]
Navarro, Victor J. [14 ]
Talwalkar, Jayant A. [15 ]
Goldstein, David B. [2 ]
Watkins, Paul B. [1 ,5 ,21 ]
机构
[1] Univ N Carolina, Sch Med, Hamner Univ N Carolina, Inst Drug Safety Sci, 6 Davis Dr,POB 12137, Res Triangle Pk, NC 27709 USA
[2] Duke Univ, Ctr Human Genome Variat, Durham, NC 27706 USA
[3] GlaxoSmithKline, Res Triangle Pk, NC USA
[4] Carolinas Med Ctr, Charlotte, NC 28203 USA
[5] Univ N Carolina, Sch Pharm, Chapel Hill, NC USA
[6] Univ So Calif, Keck Sch Med, Div Gastrointestinal & Liver Dis, Los Angeles, CA 90033 USA
[7] Univ Calif San Francisco, Calif Pacific Med Ctr, Dept Transplantat, San Francisco, CA 94143 USA
[8] Columbia Univ, Ctr Computat Biol & Bioinformat, New York, NY USA
[9] Columbia Univ, Dept Comp Sci, New York, NY 10027 USA
[10] Indiana Univ, Div Gastroenterol Hepatol, Sch Med, Indianapolis, IN USA
[11] Univ Michigan, Dept Internal Med, Ann Arbor, MI 48109 USA
[12] NIDDKD, Bethesda, MD 20892 USA
[13] Univ Texas SW Med Ctr Dallas, Div Gastroenterol Hepatol & Nutr, Dallas, TX 75390 USA
[14] Thomas Jefferson Univ, Philadelphia, PA 19107 USA
[15] Mayo Clin, Rochester, MN USA
[16] Newcastle Univ, Inst Cellular Med, Newcastle Upon Tyne NE1 7RU, Tyne & Wear, England
[17] Kings Coll London, London WC2R 2LS, England
[18] Univ Nottingham Hosp, NIHR Biomed Res Unit Gastrointestinal & Liver Dis, Nottingham NG7 2UH, England
[19] Univ Nottingham, Nottingham NG7 2RD, England
[20] Univ Malaga, IBIMA, CIBERehd, Hosp Univ Virgen Victoria, E-29071 Malaga, Spain
[21] Univ N Carolina, Sch Med, Chapel Hill, NC USA
基金
英国惠康基金;
关键词
drug-induced liver injury; genome-wide association study; pharmacogenetics; GENOME-WIDE; ASSOCIATION; POPULATION; SAMPLE; GAMMA; SET;
D O I
10.1097/FPC.0b013e3283589a76
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 [微生物学]; 090105 [作物生产系统与生态工程];
摘要
Background and aims Drug-induced liver injury (DILI) is a serious adverse drug event that is suspected to have a heritable component. We carried out a genome-wide association study of 783 individuals of European ancestry who experienced DILI due to more than 200 implicated drugs. Methods DILI patients from the US-based Drug-Induced Liver Injury Network (n=401) and three international registries (n=382) were genotyped with the Illumina 1Mduo BeadChip and compared with population controls (n=3001). Potential associations were tested in 307 independent Drug-Induced Liver Injury Network cases. Results After accounting for known major histocompatibility complex risk alleles for flucloxacillin-DILI and amoxicillin/clavulanate-DILI, there were no genome-wide significant associations, including in the major histocompatibility complex region. Stratification of DILI cases according to clinical phenotypes (injury type, latency, age of onset) also did not show significant associations. An analysis of hepatocellular DILI (n=285) restricted to 193 single-nucleotide polymorphisms previously associated with autoimmune disease showed a trend association for rs7574865, in the vicinity of signal transducer and activator of transcription 4 (STAT4) (P=4.5 x 10(-4)). This association was replicated in an independent cohort of 168 hepatocellular DILI cases (P=0.011 and 1.5 x 10(-5) for combined cohorts). No significant associations were found with stratification by other clinical or demographic variables. Conclusion Although not significant at the genome-wide level, the association between hepatocellular DILI and STAT4 is consistent with the emerging role of the immune system in DILI. However, the lack of genome-wide association study findings supports the idea that strong genetic determinants of DILI may be largely drug-specific or may reflect rare genetic variations, which were not assessed in our study. Pharmacogenetics and Genomics 22:784-795 (C) 2012 Wolters Kluwer Health vertical bar Lippincott Williams & Wilkins.
引用
收藏
页码:784 / 795
页数:12
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