Folding of a three-helix bundle at the folding speed limit

被引:52
作者
Wang, T [1 ]
Zhu, YJ [1 ]
Gai, F [1 ]
机构
[1] Univ Penn, Dept Chem, Philadelphia, PA 19104 USA
关键词
D O I
10.1021/jp049652q
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We show in this Letter that a double mutant (K51/K39V) of 1prb(7-53), the GA module of an albumin binding domain, has a maximum folding rate constant of similar to1 (mus)(-1). This value is comparable to the estimated theoretical speed limit for protein folding. In addition, we found that the mean hydrophobicity of a given tertiary fold plays an important role in controlling its folding rate.
引用
收藏
页码:3694 / 3697
页数:4
相关论文
共 26 条
  • [1] The speed limit for protein folding measured by triplet-triplet energy transfer
    Bieri, O
    Wirz, J
    Hellrung, B
    Schutkowski, M
    Drewello, M
    Kiefhaber, T
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (17) : 9597 - 9601
  • [2] Comparison of the folding processes of distantly related proteins. Importance of hydrophobic content in folding
    Calloni, G
    Taddei, N
    Plaxco, KW
    Ramponi, G
    Stefani, M
    Chiti, F
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 2003, 330 (03) : 577 - 591
  • [3] THEORETICAL PREDICTIONS OF FOLDING PATHWAYS BY USING THE PROXIMITY RULE, WITH APPLICATIONS TO BOVINE PANCREATIC TRYPSIN-INHIBITOR
    CAMACHO, CJ
    THIRUMALAI, D
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1995, 92 (05) : 1277 - 1281
  • [4] Dinner AR, 2001, NAT STRUCT BIOL, V8, P21
  • [5] Folding a protein in a computer:: An atomic description of the folding/unfolding of protein A
    García, AE
    Onuchic, JN
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (24) : 13898 - 13903
  • [6] NMR and temperature-jump measurements of de novo designed proteins demonstrate rapid folding in the absence of explicit selection for kinetics
    Gillespie, B
    Vu, DM
    Shah, PS
    Marshall, SA
    Dyer, RB
    Mayo, SL
    Plaxco, KW
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 2003, 330 (04) : 813 - 819
  • [7] Diffusion-limited contact formation in unfolded cytochrome c: Estimating the maximum rate of protein folding
    Hagen, SJ
    Hofrichter, J
    Szabo, A
    Eaton, WA
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (21) : 11615 - 11617
  • [8] Helix formation via conformation diffusion search
    Huang, CY
    Getahun, Z
    Zhu, YJ
    Klemke, JW
    DeGrado, WF
    Gai, F
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (05) : 2788 - 2793
  • [9] Temperature dependence of the CN stretching vibration of a nitrile-derivatized phenylalanine in water
    Huang, CY
    Wang, T
    Gai, F
    [J]. CHEMICAL PHYSICS LETTERS, 2003, 371 (5-6) : 731 - 738
  • [10] THE GA MODULE, A MOBILE ALBUMIN-BINDING BACTERIAL DOMAIN, ADOPTS A 3-HELIX-BUNDLE STRUCTURE
    JOHANSSON, MU
    DECHATEAU, M
    BJORCK, L
    FORSEN, S
    DRAKENBERG, T
    WIKSTROM, M
    [J]. FEBS LETTERS, 1995, 374 (02) : 257 - 261