Solution structure of the DNA-binding domain of MafG

被引:41
作者
Kusunoki, H
Motohashi, H
Katsuoka, F
Morohashi, A
Yamamoto, M
Tanaka, T [1 ]
机构
[1] Univ Tsukuba, Ctr Tsukuba Adv Res Alliance, Tsukuba, Ibaraki 3058577, Japan
[2] Univ Tsukuba, Inst Basic Med Sci, Tsukuba, Ibaraki 3058575, Japan
[3] Univ Tsukuba, Inst Appl Biochem, Tsukuba, Ibaraki 3058572, Japan
[4] Banyu Tsukuba Res Inst, Tsukuba, Ibaraki 3002611, Japan
基金
日本学术振兴会;
关键词
D O I
10.1038/nsb771
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The Maf family proteins, which constitute a subgroup of basic region-leucine zipper (bZIP) proteins, function as transcriptional regulators of cellular differentiation. Together with the basic region, the Maf extended homology region (EHR), conserved only within the Maf family, defines the DNA binding specific to Mafs. Here we present the first NMR-derived structure of the DNA-binding domain (residues 1-76) of MafG, which contains the EHR and the basic region. The structure consists of three alpha-helices and resembles the fold of the DNA-binding domain of Skn-1, a developmental transcription factor of Caenorhabditis elegans. The structural similarity between MafG and Skn-1 enables us to propose a possible mechanism by which Maf family proteins recognize their consensus DNA sequences.
引用
收藏
页码:252 / 256
页数:5
相关论文
共 31 条
[1]   Twelve species of the nucleoid-associated protein from Escherichia coli -: Sequence recognition specificity and DNA binding affinity [J].
Azam, TA ;
Ishihama, A .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1999, 274 (46) :33105-33113
[2]   The Maf transcription factors: regulators of differentiation [J].
Blank, V ;
Andrews, NC .
TRENDS IN BIOCHEMICAL SCIENCES, 1997, 22 (11) :437-441
[3]   CHARMM - A PROGRAM FOR MACROMOLECULAR ENERGY, MINIMIZATION, AND DYNAMICS CALCULATIONS [J].
BROOKS, BR ;
BRUCCOLERI, RE ;
OLAFSON, BD ;
STATES, DJ ;
SWAMINATHAN, S ;
KARPLUS, M .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1983, 4 (02) :187-217
[4]  
Brunger AT., 1993, X PLOR VERSION 3 1 S
[5]   NMRPIPE - A MULTIDIMENSIONAL SPECTRAL PROCESSING SYSTEM BASED ON UNIX PIPES [J].
DELAGLIO, F ;
GRZESIEK, S ;
VUISTER, GW ;
ZHU, G ;
PFEIFER, J ;
BAX, A .
JOURNAL OF BIOMOLECULAR NMR, 1995, 6 (03) :277-293
[6]   THE GCN4 BASIC REGION LEUCINE ZIPPER BINDS DNA AS A DIMER OF UNINTERRUPTED ALPHA-HELICES - CRYSTAL-STRUCTURE OF THE PROTEIN-DNA COMPLEX [J].
ELLENBERGER, TE ;
BRANDL, CJ ;
STRUHL, K ;
HARRISON, SC .
CELL, 1992, 71 (07) :1223-1237
[7]   BACKBONE DYNAMICS OF A FREE AND A PHOSPHOPEPTIDE-COMPLEXED SRC HOMOLOGY-2 DOMAIN STUDIED BY N-15 NMR RELAXATION [J].
FARROW, NA ;
MUHANDIRAM, R ;
SINGER, AU ;
PASCAL, SM ;
KAY, CM ;
GISH, G ;
SHOELSON, SE ;
PAWSON, T ;
FORMANKAY, JD ;
KAY, LE .
BIOCHEMISTRY, 1994, 33 (19) :5984-6003
[8]   A COMMON-SENSE APPROACH TO PEAK PICKING IN 2-DIMENSIONAL, 3-DIMENSIONAL, AND 4-DIMENSIONAL SPECTRA USING AUTOMATIC COMPUTER-ANALYSIS OF CONTOUR DIAGRAMS [J].
GARRETT, DS ;
POWERS, R ;
GRONENBORN, AM ;
CLORE, GM .
JOURNAL OF MAGNETIC RESONANCE, 1991, 95 (01) :214-220
[9]   CRYSTAL-STRUCTURE OF THE HETERODIMERIC BZIP TRANSCRIPTION FACTOR C-FOS-C-JUN BOUND TO DNA [J].
GLOVER, JNM ;
HARRISON, SC .
NATURE, 1995, 373 (6511) :257-261
[10]   HELIX STOP SIGNALS IN PROTEINS AND PEPTIDES - THE CAPPING BOX [J].
HARPER, ET ;
ROSE, GD .
BIOCHEMISTRY, 1993, 32 (30) :7605-7609