PNA for rapid microbiology

被引:134
作者
Stender, H [1 ]
Fiandaca, M [1 ]
Hyldig-Nielsen, JJ [1 ]
Coull, J [1 ]
机构
[1] Boston Probes Inc, Bedford, MA 01730 USA
关键词
PNA; rapid microbiology; rRNA sequence;
D O I
10.1016/S0167-7012(01)00340-2
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The acceptance of rRNA sequence diversity as a criterion for phylogenctic discrimination heralds the transition from microbiological identification methods based on phenotypic markers to assays employing molecular techniques. Robust amplification assays and sensitive direct detection methods are rapidly becoming the standard protocols of microbiology laboratories. The emergence of peptide nucleic acid (PNA) from its status as an academic curiosity to that of a promising and powerful molecular too[, coincides with, and complements, the transition to rapid molecular tests. The unique properties of PNA enable the development of assay formats, which go above and beyond the possibilities of DNA probes. PNA probes targeting specific rRNA sequences of yeast and bacteria with clinical, environmental, and industrial value have recently been developed and applied to a variety of rapid assay formats. Some simply incorporate the sensitivity and specificity of PNA probes into traditional methods, such as membrane filtration and microscopic analysis, others involve recent techniques such as real-time and end-point analysis of amplification reactions. (C) 2002 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:1 / 17
页数:17
相关论文
共 80 条
[1]  
Abramson Richard D., 1993, Current Opinion in Biotechnology, V4, P41, DOI 10.1016/0958-1669(93)90030-Z
[2]   IDENTIFICATION OF INDIVIDUAL PROKARYOTIC CELLS BY USING ENZYME-LABELED, RIBOSOMAL-RNA-TARGETED OLIGONUCLEOTIDE PROBES [J].
AMANN, RI ;
ZARDA, B ;
STAHL, DA ;
SCHLEIFER, KH .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1992, 58 (09) :3007-3011
[3]   PHYLOGENETIC IDENTIFICATION AND IN-SITU DETECTION OF INDIVIDUAL MICROBIAL-CELLS WITHOUT CULTIVATION [J].
AMANN, RI ;
LUDWIG, W ;
SCHLEIFER, KH .
MICROBIOLOGICAL REVIEWS, 1995, 59 (01) :143-169
[4]   Use of nucleic acid probes for identification of Mycobacterium tuberculosis directly from MB/BacT bottles [J].
Badak, FZ ;
Goksel, S ;
Sertoz, R ;
Nafile, B ;
Ermertcan, S ;
Cavusoglu, C ;
Bilgic, A .
JOURNAL OF CLINICAL MICROBIOLOGY, 1999, 37 (05) :1602-1605
[5]   FLOW CYTOMETRIC DETECTION OF RIBOSOMAL-RNA IN SUSPENDED CELLS BY FLUORESCENT INSITU HYBRIDIZATION [J].
BAUMAN, JGJ ;
BENTVELZEN, P .
CYTOMETRY, 1988, 9 (06) :517-524
[6]   PHYLOGENETIC STAINS - RIBOSOMAL RNA-BASED PROBES FOR THE IDENTIFICATION OF SINGLE CELLS [J].
DELONG, EF ;
WICKHAM, GS ;
PACE, NR .
SCIENCE, 1989, 243 (4896) :1360-1363
[7]   STABILITY OF PEPTIDE NUCLEIC-ACIDS IN HUMAN SERUM AND CELLULAR-EXTRACTS [J].
DEMIDOV, VV ;
POTAMAN, VN ;
FRANKKAMENETSKII, MD ;
EGHOLM, M ;
BUCHARD, O ;
SONNICHSEN, SH ;
NIELSEN, PE .
BIOCHEMICAL PHARMACOLOGY, 1994, 48 (06) :1310-1313
[8]  
Drobniewski FA, 2000, J CLIN MICROBIOL, V38, P444
[9]   PNA HYBRIDIZES TO COMPLEMENTARY OLIGONUCLEOTIDES OBEYING THE WATSON-CRICK HYDROGEN-BONDING RULES [J].
EGHOLM, M ;
BUCHARDT, O ;
CHRISTENSEN, L ;
BEHRENS, C ;
FREIER, SM ;
DRIVER, DA ;
BERG, RH ;
KIM, SK ;
NORDEN, B ;
NIELSEN, PE .
NATURE, 1993, 365 (6446) :566-568
[10]  
Fiandaca Mark J., 1999, P129